Pairwise Alignments

Query, 720 a.a., ornithine decarboxylase SpeF from Vibrio cholerae E7946 ATCC 55056

Subject, 713 a.a., lysine decarboxylase LdcC from Escherichia coli ECOR38

 Score =  316 bits (810), Expect = 2e-90
 Identities = 207/644 (32%), Positives = 317/644 (49%), Gaps = 48/644 (7%)

Query: 82  FELCDAKVEFYGKQVETAVRRYQESLLPPFFGTLKKYVDMGNSTFACPGHQGGQFFRKHP 141
           FE    + E    ++      Y +++ PPF   L  YV     TF  PGH GG  ++K P
Sbjct: 103 FEYALGQAEDIAIRMRQYTNEYLDNITPPFTKALFTYVKERKYTFCTPGHMGGTAYQKSP 162

Query: 142 VGRQFFDFFGETLFRSDMCNADVRLGDLLIHEGAPHDAQAYAAKVYNADKTYFVLNGTSA 201
           VG  F+DFFG    ++D+  +   LG LL H G   +A+ Y A+ + A+++Y V NGTS 
Sbjct: 163 VGCLFYDFFGGNTLKADVSISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYIVTNGTST 222

Query: 202 SNKVVCNALLTPGDLVLFDRNNHKSNHHGALIQAGATPVYLETARNPFGFIGGIDTHCFN 261
           SNK+V       G  +L DRN HKS  H  L+     PV+L+  RN  G +GGI      
Sbjct: 223 SNKIVGMYAAPSGSTLLIDRNCHKSLAH-LLMMNDVVPVWLKPTRNALGILGGIP----R 277

Query: 262 ESYLRDAVRNVDPSRAEAKRPFRLAIIQLGTYDGTIYNA---RQVVDRIGHLCDYILFDS 318
             + RD++     +  +A+ P   A+I   TYDG +YN    +Q +D        I FDS
Sbjct: 278 REFTRDSIEEKVAATTQAQWPVH-AVITNSTYDGLLYNTDWIKQTLD-----VPSIHFDS 331

Query: 319 AWVGYEQFIPMMKDCSPLLLDLKPEDPGIIVTQSVHKQQAGFSQTSQIHKKDHHIKGQER 378
           AWV Y  F P+ +  S +  + +     I  TQS HK  A  SQ S I     HIKG+  
Sbjct: 332 AWVPYTHFHPIYQGKSGMSGE-RVAGKVIFETQSTHKMLAALSQASLI-----HIKGE-- 383

Query: 379 YCNHKRFNNAFMLHASTSPFYPLFAALDVNAKMHEGDSGRYLWREAVKTGIEARKLLMKK 438
             + + FN AFM+H +TSP YP+ A+++  A M  G+ G+ L   +V+  +  RK + + 
Sbjct: 384 -YDEEAFNEAFMMHTTTSPSYPIVASVETAAAMLRGNPGKRLINRSVERALHFRKEVQRL 442

Query: 439 CK-----YIKPFIPPMIEGKPWQSHPTEQIADDLRFFEFEPGQKWHAFEGYEHGQYFVDP 493
            +     +   + PP +              D+   +   PG++WH F   +    F+DP
Sbjct: 443 REESDGWFFDIWQPPQV--------------DEAECWPVAPGEQWHGFSDADANHMFLDP 488

Query: 494 CKFLLTTPGIDPETGEYEHFGIPATILANFLRENNIIPEKCDLNSILFLLTPAEDMAKMQ 553
            K  + TPG+D E G     GIPA ++A FL E  I+ EK    ++LFL +   D  K  
Sbjct: 489 VKVTILTPGMD-EQGNMSEEGIPAALVAKFLDERGIVVEKTGPYNLLFLFSIGIDKTKAM 547

Query: 554 HLVAQIARFERLIEEDAPLSEVLPNVYRANRERYKGYTIRQLCQEMHDLYVSHDVKQLQK 613
            L+  +  F+R  + +  +  +LP++Y  + + Y+   I+ L Q +H L   HD+  L  
Sbjct: 548 GLLRGLTEFKRSYDLNLRIKNMLPDLYAEDPDFYRSMRIQDLAQGIHKLIRKHDLPGLML 607

Query: 614 EMFRARYFPRAVMNPQEANLAFVRGQVELVPLREVEGRIAAEGALPYPPGVLCVVPGEIW 673
             F     P  +M P +A    ++G+VE + L ++ GR++A   LPYPPGV  ++PGE+ 
Sbjct: 608 RAFDT--LPEMIMTPHQAWQRQIKGEVETIALEQLVGRVSANMILPYPPGVPLLMPGEML 665

Query: 674 ---GGSVQRYFLALEEGINLLPGFAPELQGVYLEPTGEGRVQAM 714
                +V  + L L       PGF  ++ G   +  G  RV+ +
Sbjct: 666 TKESRTVLDFLLMLCSVGQHYPGFETDIHGAKQDEDGVYRVRVL 709