Pairwise Alignments

Query, 720 a.a., ornithine decarboxylase SpeF from Vibrio cholerae E7946 ATCC 55056

Subject, 715 a.a., lysine decarboxylase, acid-inducible from Escherichia coli BL21

 Score =  322 bits (824), Expect = 5e-92
 Identities = 218/640 (34%), Positives = 318/640 (49%), Gaps = 40/640 (6%)

Query: 82  FELCDAKVEFYGKQVETAVRRYQESLLPPFFGTLKKYVDMGNSTFACPGHQGGQFFRKHP 141
           FE      E    +++     Y  ++LPP    L KYV  G  TF  PGH GG  F+K P
Sbjct: 103 FEYALGAAEDIANKIKQTTDEYINTILPPLTKALFKYVREGKYTFCTPGHMGGTAFQKSP 162

Query: 142 VGRQFFDFFGETLFRSDMCNADVRLGDLLIHEGAPHDAQAYAAKVYNADKTYFVLNGTSA 201
           VG  F+DFFG    +SD+  +   LG LL H G   +A+ Y A+V+NAD++Y V NGTS 
Sbjct: 163 VGSLFYDFFGPNTMKSDISISVSELGSLLDHSGPHKEAEQYIARVFNADRSYMVTNGTST 222

Query: 202 SNKVVCNALLTPGDLVLFDRNNHKSNHHGALIQAGATPVYLETARNPFGFIGGIDTHCFN 261
           +NK+V       G  +L DRN HKS  H  ++ +  TP+Y    RN +G +GGI    F 
Sbjct: 223 ANKIVGMYSAPAGSTILIDRNCHKSLTH-LMMMSDVTPIYFRPTRNAYGILGGIPQSEFQ 281

Query: 262 ESYLRDAVRNVDPSRAEAKRPFRLAIIQLGTYDGTIYNARQVVDRIGHLCDY--ILFDSA 319
            + +   V+        A  P   A+I   TYDG +YN     D I    D   I FDSA
Sbjct: 282 HATIAKRVKET----PNATWPVH-AVITNSTYDGLLYN----TDFIKKTLDVKSIHFDSA 332

Query: 320 WVGYEQFIPMMK-DCSPLLLDLKPEDPGIIVTQSVHKQQAGFSQTSQIHKKDHHIKGQER 378
           WV Y  F P+ +  C   +   + E   I  TQS HK  A FSQ S I     H+KG   
Sbjct: 333 WVPYTNFSPIYEGKCG--MSGGRVEGKVIYETQSTHKLLAAFSQASMI-----HVKGD-- 383

Query: 379 YCNHKRFNNAFMLHASTSPFYPLFAALDVNAKMHEGDSGRYLWREAVKTGIEARKLLMKK 438
             N + FN A+M+H +TSP Y + A+ +  A M +G++G+ L   +++  I+ RK + + 
Sbjct: 384 -VNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKR- 441

Query: 439 CKYIKPFIPPMIEGKPWQSHPTEQIADDLRFFEFEPGQKWHAFEGYEHGQYFVDPCKFLL 498
                  +    +G  +     + I D    +       WH F+  ++   ++DP K  L
Sbjct: 442 -------LRTESDGWFFDVWQPDHI-DTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTL 493

Query: 499 TTPGIDPETGEYEHFGIPATILANFLRENNIIPEKCDLNSILFLLTPAEDMAKMQHLVAQ 558
            TPG++ + G    FGIPA+I+A +L E+ I+ EK    ++LFL +   D  K   L+  
Sbjct: 494 LTPGMEKD-GTMSDFGIPASIVAKYLDEHGIVVEKTGPYNLLFLFSIGIDKTKALSLLRA 552

Query: 559 IARFERLIEEDAPLSEVLPNVYRANRERYKGYTIRQLCQEMHDLYVSHDVKQLQKEMFRA 618
           +  F+R  + +  +  +LP++YR + E Y+   I++L Q +H L V H++  L   M+RA
Sbjct: 553 LTDFKRAFDLNLRVKNMLPSLYREDPEFYENMRIQELAQNIHKLIVHHNLPDL---MYRA 609

Query: 619 -RYFPRAVMNPQEANLAFVRGQVELVPLREVEGRIAAEGALPYPPGVLCVVPGEI---WG 674
               P  VM P  A    + G  E V L E+ GRI A   LPYPPGV  V+PGE+     
Sbjct: 610 FEVLPTMVMTPYAAFQKELHGMTEEVYLDEMVGRINANMILPYPPGVPLVMPGEMITEES 669

Query: 675 GSVQRYFLALEEGINLLPGFAPELQGVYLEPTGEGRVQAM 714
             V  +   L E     PGF  ++ G Y +  G   V+ +
Sbjct: 670 RPVLEFLQMLCEIGAHYPGFETDIHGAYRQADGRYTVKVL 709