Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  159 bits (401), Expect = 1e-43
 Identities = 97/294 (32%), Positives = 155/294 (52%), Gaps = 12/294 (4%)

Query: 10  DIRAFVLIAKLGNFTKAAEELGVSRSHVSRQLSQLENSMGVTLVIRTTRSLSLTDAGELF 69
           D+R F  + + G+FT AAE+LG+S+  VSR+L QLE+ +GV L+ R+TR L +T  G+ +
Sbjct: 6   DMRLFCQVMESGSFTAAAEQLGLSKQFVSRRLIQLEDRLGVRLLNRSTRRLDVTPLGQSY 65

Query: 70  YRQCEQALSSIEQAVLAAVDDVQEARGELRINS----VGGHIGEELIADICSAFMQENPD 125
           Y    + LS +EQ          E RG +R+++       H+G      +   F++  P 
Sbjct: 66  YESALRLLSEVEQVEQGIAGQNSEPRGTIRLSAPLSFAMAHLG-----CLLPLFLRRYPQ 120

Query: 126 VRIHLDFSSHRVDLIEEGFDVAFRMGKLEDASFVARKLTEIRMSTLASPAYFTLCGQPQH 185
           V + +D S   VDLI EG+D+  R+G LED++ +AR++  I     ASP Y  L G P  
Sbjct: 121 VAVEVDLSDRPVDLIGEGYDLVLRIGTLEDSTLIARRIASIPRVYCASPDYLALRGTPHK 180

Query: 186 PKQLADHRCLT-GSVKRWSYQHKETKQTLDVPVDGDLQCKNGRVLVRAALAHNGIIRVPT 244
           P  LA+H CL  G  ++  ++ K   Q L+  V G ++  NG +L   A+A  G+  +PT
Sbjct: 181 PDDLAEHDCLPYGHGRQVQWRFKGKVQALN--VSGRMRVNNGDLLRDTAIAGLGVTYLPT 238

Query: 245 FYCHQELARGELVEVFQDWHIPSVEFSLIYHKDKYQPVRLKRFIEFSKRYFEQG 298
           F     L  G LV V  ++   ++  S +Y + +     ++  +EF +     G
Sbjct: 239 FIVGDALKDGRLVTVLDEFAPEALTLSAVYPQHRQGSRPVQALVEFLRERLASG 292