Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  153 bits (386), Expect = 5e-42
 Identities = 91/292 (31%), Positives = 152/292 (52%), Gaps = 9/292 (3%)

Query: 3   LNQLNLADIRAFVLIAKLGNFTKAAEELGVSRSHVSRQLSQLENSMGVTLVIRTTRSLSL 62
           +++LN   I  FV + + G+F+  A E+  ++  +S+ L  LE  +G  L+ R+TR LSL
Sbjct: 1   MDKLNAMAI--FVRVIERGSFSAVAREMQTTQPTISKILRALETELGGKLIARSTRQLSL 58

Query: 63  TDAGELFYRQCEQALSSIEQAVLAAVDDVQEARGELRINSVGGHIGEELIADICSAFMQE 122
           TD G+ +Y  C + L++++ A  +     +   G LRI S     G   IA   S F+Q+
Sbjct: 59  TDEGQRYYSHCREILAAVDAAEHSFQTGKEAIAGPLRIGS-SVSFGRLHIAARLSDFLQQ 117

Query: 123 NPDVRIHLDFSSHRVDLIEEGFDVAFRMGKLEDASFVARKLTEIRMSTLASPAYFTLCGQ 182
            PDV++ L  + H  D++ EG DV  R+G+L D+  +AR++      TLASP Y      
Sbjct: 118 YPDVQVDLQLNDHLQDMVSEGLDVTLRIGELRDSGLIARQIGTTHRVTLASPDYLARHPA 177

Query: 183 PQHPKQLADHRC----LTGSVKRWSYQHKETKQTLDVPVDGDLQCKNGRVLVRAALAHNG 238
           PQ P +L+ H C    L  S  +W Y+ + T+Q+  V + G+ Q  N   +    L   G
Sbjct: 178 PQTPHELSQHNCLLFNLLSSQNQWVYEKEGTRQS--VRITGNAQSNNSEAVREMVLTGLG 235

Query: 239 IIRVPTFYCHQELARGELVEVFQDWHIPSVEFSLIYHKDKYQPVRLKRFIEF 290
           I   P +  + +L  G +V + QD+   S+    +   ++ Q  R+K F+++
Sbjct: 236 IALSPLWLFYDDLKAGRVVALLQDYTAQSLPIHAVSAPNRRQSARVKAFVDY 287