Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  155 bits (392), Expect = 1e-42
 Identities = 101/288 (35%), Positives = 155/288 (53%), Gaps = 4/288 (1%)

Query: 11  IRAFVLIAKLGNFTKAAEELGVSRSHVSRQLSQLENSMGVTLVIRTTRSLSLTDAGELFY 70
           +R FV +  LG+ + AA+ L +SR  VSR L++LE+ +G  L+ RTTR LSLT AG+   
Sbjct: 7   MRVFVTVIDLGSQSAAADYLQLSRPVVSRYLAELEDWVGTRLMQRTTRKLSLTAAGQETL 66

Query: 71  RQCEQALSSIEQAVLAAVDDVQEA-RGELRINSVGGHIGEELIADICSAFMQENPDVRIH 129
            +C Q L  +   + AAV   ++A RG LRI SV    G+  + D  +A+++  PDV++ 
Sbjct: 67  PRCRQLLE-LAGDLQAAVQQPEDAPRGALRI-SVSTSFGQAQLVDAVAAYVRRFPDVKVE 124

Query: 130 LDFSSHRVDLIEEGFDVAFRMGKLEDASFVARKLTEIRMSTLASPAYFTLCGQPQHPKQL 189
           L      V+L++E  D+A R     D S +AR+L+  R    A+PAY    G PQ  ++L
Sbjct: 125 LQMLDRTVNLVDERIDLAIRTSNDVDPSLIARRLSVCRSVVCAAPAYLNERGTPQRVEEL 184

Query: 190 ADHRCLTGSVKRWSYQH-KETKQTLDVPVDGDLQCKNGRVLVRAALAHNGIIRVPTFYCH 248
           + H CLT +    S  H     Q + VPV G++       L RAALA  GI  +PT+   
Sbjct: 185 SLHNCLTHAYFGHSLWHFAVAGQQVAVPVSGNISANEVMTLQRAALAGAGITMLPTYQAA 244

Query: 249 QELARGELVEVFQDWHIPSVEFSLIYHKDKYQPVRLKRFIEFSKRYFE 296
             + RGELV +  +     +  + +Y   K+ P  L+  ++F  + F+
Sbjct: 245 DAIRRGELVRLLPEAKPRELNLNAVYTSRKHMPATLRSMLDFLVQRFK 292