Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 292 a.a., D-malate degradation protein R from Alteromonas macleodii MIT1002

 Score =  165 bits (418), Expect = 1e-45
 Identities = 94/283 (33%), Positives = 159/283 (56%), Gaps = 3/283 (1%)

Query: 8   LADIRAFVLIAKLGNFTKAAEELGVSRSHVSRQLSQLENSMGVTLVIRTTRSLSLTDAGE 67
           L  I  F  +A +GNFT AA +L  S + +SR+++ LE  +GV L+ RTTRS+SLT+AG 
Sbjct: 4   LEGIAEFCAVADVGNFTGAANKLDTSVAQISRKVASLEKQLGVKLLQRTTRSVSLTEAGT 63

Query: 68  LFYRQCEQALSSIEQAVLAAVDDVQEARGELRINSVGGHIGEELIADICSAFMQENPDVR 127
            +++Q   AL ++E A LA        +G +++ +     GE  IA + + FMQ+   + 
Sbjct: 64  QYFQQAMPALKALEDAQLAVSALQASPQGLIKLTAPVA-FGEAFIAPLLNTFMQKYAGIS 122

Query: 128 IHLDFSSHRVDLIEEGFDVAFRMGKLEDASFVARKLTEIRMSTLASPAYFTLCGQPQHPK 187
           +   FS+ ++D++E+G D+A R+GKLED++ VA+KL    +    S  YF   GQP   +
Sbjct: 123 VQCTFSNEKLDIVEQGLDLAIRIGKLEDSTLVAKKLATRHLFVCGSRDYFKEQGQPISIE 182

Query: 188 QLADHRCLTGSVKRWSYQHKETKQTLDVPVDGDLQCKNGRVLVRAALAHNGIIRVPTFYC 247
           +L +H  L GS   W        Q+  +PV G ++  +G  L  AA+A  GI ++P FY 
Sbjct: 183 ELKEHSLLVGSQPYWRLLIDNKIQS--IPVQGRVRYNSGNALCSAAVAGLGIAQLPGFYV 240

Query: 248 HQELARGELVEVFQDWHIPSVEFSLIYHKDKYQPVRLKRFIEF 290
            + LA G+L+E+F ++         ++  ++    +++  ++F
Sbjct: 241 RKALASGQLIELFPEYKDKQEAIWAVFPSNRNVAPKIRLLVDF 283