Pairwise Alignments

Query, 770 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  242 bits (617), Expect = 6e-68
 Identities = 165/523 (31%), Positives = 274/523 (52%), Gaps = 35/523 (6%)

Query: 255 ASFISTPIFNGSTRVGVLIFQMPVDEINSIMTFDSRWKENGLGNTGQSYLVGSDHLMRSQ 314
           ASFI   + +G+ + G++   + V+ I  ++T   +   NG G            L+ S 
Sbjct: 216 ASFIEPIMIDGAFQ-GIVGADLSVNFIQDMLTSADQKLYNGAGEMA---------LISSN 265

Query: 315 PRLLLEDASAFIGTLNSLTGDRAAINQIRSKQSAIGLLKVSSQAVDKALRGESGLMMEST 374
            RL+     A      S  G++A+     ++ + +  LK           GE    ++  
Sbjct: 266 GRLVAYTKDA------SKLGEKASDLLDSNELTNLNQLKA----------GEVRYDIDKE 309

Query: 375 HASVQLLSAYTPLDALGLRWALVTEMQADEALADIAKLSDEL-------IMKVLIAIVIG 427
           H  ++L   +T +     RW L+ ++     +AD  KL  +L       I  + IA ++ 
Sbjct: 310 HGHIELFLPFT-IGQADARWTLMLQLPLSAVMADSQKLQSDLEAQRKTDIFGMTIAGLLI 368

Query: 428 AVIATLAAWMVGNGISKPIRDSISQIQRMSR-DNDLTVRLSEQGSDEIRQLAQALNRMLS 486
           A I  L  W+VG+GI++P++  ++ +  +++ + DLT RL+   +DE+  +A   N  L 
Sbjct: 369 AGIGLLVIWLVGHGIARPLKQMVAMLNDIAQGEGDLTRRLTSDRADELGAIANGFNTFLI 428

Query: 487 HLQDTICQFAHTTDKLNSHTQTITHNMTGTRNSVSEQHERTDSVVTAVNEMSASITEVSE 546
            LQ  I Q   +  K++  ++        T   V +Q    D V TAV+EM+A+  +V+ 
Sbjct: 429 KLQGMITQVVSSVQKVSDSSEHTADIAIRTNQGVHKQMVEIDQVATAVHEMTATAQDVAR 488

Query: 547 FAQRAATFVQEANQKGHGGVSVGNELARDMTSINQQMASAVEAIARLNHESQSIASVLDV 606
            A +AA     A+Q    G+ +  + +  + ++ +++  AV  +  L  +S++I ++L  
Sbjct: 489 NATQAAQAASHADQAASQGMRIVRDTSTSIGALAEEIGKAVSVVQTLAKDSENINAILTA 548

Query: 607 IQAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAAKTQTSTEEIRTKIDRLQKE 666
           I+ IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLA KTQ +TEEI+T I +LQ+ 
Sbjct: 549 IRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQKATEEIQTMIQQLQQG 608

Query: 667 TQSVVNCIEEANNTVVRGVATCHSNTDMLKQIVDMLNELNEMNIQIATATEQQRGVTEEI 726
           T+ VV  +E++ +     V       + L+ I   ++ +N+MN QIA+A E+Q  V E+I
Sbjct: 609 TRDVVRVMEDSQSRTDESVQHAAKAAEALETITQAVSVINDMNTQIASAAEEQSAVAEDI 668

Query: 727 NANITSISDVSASVTVQVGEVNAIVNELSDEAMELSKRMGQFR 769
           N N+ +I  V+  V     E +A   +L+  A +  + + QF+
Sbjct: 669 NRNVINIGQVANEVAGGADESSAASADLTKLAEQQRRLINQFK 711