Pairwise Alignments

Query, 770 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  212 bits (540), Expect = 4e-59
 Identities = 154/451 (34%), Positives = 221/451 (49%), Gaps = 38/451 (8%)

Query: 319 LEDASAFIGTLNSLTGDRAAINQIRSKQSAIGLLKVSSQAVDKALRGESGLMMESTHASV 378
           LE+AS       SL   RAA++Q R  Q+A         A    L G S           
Sbjct: 225 LEEAST------SLQAYRAAVSQYRDSQTAAAAALKIMSAQGDTLLGHS----------- 267

Query: 379 QLLSAYTPLDALGLRWALVTEMQADEALADIAKLSDELIMKVLIAIVIGAVIATLAAWMV 438
                    D L L   +V +       AD A     L++  ++A++ G V    AAW +
Sbjct: 268 ---------DKLTLSQTVVRD-------ADAAHAKQLLLLATVLALIFGLV----AAWAI 307

Query: 439 GNGISKPIRDSISQIQRMSRDNDLTVRLSEQGSDEIRQLAQALNRMLSHLQDTICQFAHT 498
              I  P+  ++   QR++   DL+  L+    DE+ QL +A+  M   L++ I   +  
Sbjct: 308 TRQIVIPLNQTLQVAQRVA-SGDLSHNLTSMRQDELGQLQRAMQSMTVGLRELIGGISDG 366

Query: 499 TDKLNSHTQTITHNMTGTRNSVSEQHERTDSVVTAVNEMSASITEVSEFAQRAATFVQEA 558
             ++ S  + ++     T   V+ Q   TD V TA+NEM+A++ EV+  A+ A+     A
Sbjct: 367 VTQIASAAEQLSAVTEQTSAGVNSQKVETDQVATAMNEMAATVQEVARNAEEASEAAVAA 426

Query: 559 NQKGHGGVSVGNELARDMTSINQQMASAVEAIARLNHESQSIASVLDVIQAIAEQTNLLA 618
           +Q+   G  V  E    +  +  ++ ++  A+  L  ES  I SVLDVI+++A+QTNLLA
Sbjct: 427 DQQAREGDKVVGEAIAQIERLATEVGNSTVAMGDLKRESDKIGSVLDVIKSVAQQTNLLA 486

Query: 619 LNAAIEAARAGEQGRGFAVVADEVRNLAAKTQTSTEEIRTKIDRLQKETQSVVNCIEEAN 678
           LNAAIEAARAGE GRGFAVVADEVR+LA +TQ STEEI   I  LQ  TQ V   ++ + 
Sbjct: 487 LNAAIEAARAGEAGRGFAVVADEVRSLAQRTQKSTEEIEELIVGLQSGTQQVATIMDNSR 546

Query: 679 NTVVRGVATCHSNTDMLKQIVDMLNELNEMNIQIATATEQQRGVTEEINANITSISDVSA 738
                 V         L  I   ++ +  MN QIATA EQQ  V EEIN ++ ++ DVS 
Sbjct: 547 GLTDSSVELPRRAGSALASITRTVSTIQAMNSQIATAAEQQSAVAEEINRSVLNVRDVSE 606

Query: 739 SVTVQVGEVNAIVNELSDEAMELSKRMGQFR 769
                  E  A   EL+     L   +G+FR
Sbjct: 607 QTAAASEETAASSTELARLGTHLQALVGRFR 637