Pairwise Alignments

Query, 770 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  199 bits (505), Expect = 4e-55
 Identities = 127/378 (33%), Positives = 214/378 (56%), Gaps = 7/378 (1%)

Query: 394 WALVTEMQADEALADIAKLSDELIMKVLIAIVIGAVIATLAAWMVGNGISKPIRDSISQI 453
           W + + +  D+  A+    S ++     I + I  V+A L + ++   I +P++ +++ +
Sbjct: 171 WIIGSGVYVDDVQAEF---SSQVWKASFIGLAIALVMALLVS-LIARSIVRPLQAAVNAM 226

Query: 454 QRM-SRDNDLTVRLSEQGSDEIRQLAQALNRMLSHLQDTICQFAHTTDKLNSHTQTITHN 512
             + S ++DLT  L   G DE+ QL++  N   + L+  + Q     + L   +Q +  N
Sbjct: 227 GNIASGESDLTRSLDTHGQDEVTQLSRHFNSFTAKLRQVVGQLQVCANALGQSSQELGSN 286

Query: 513 MTGTRNSVSEQHERTDSVVTAVNEMSASITEVSEFAQRAATFVQEAN-QKGHGGVSVGNE 571
            T   +   +Q ++ + V TA+NE++  + +V++ A+ AA+ +++A  Q   G V++ + 
Sbjct: 287 ATQAHDRSQQQSQQMELVATAINEVTYGVQDVAKNAEHAASEMRDAQAQAQQGQVNIDSS 346

Query: 572 LARDMTSINQQMASAVEAIARLNHESQSIASVLDVIQAIAEQTNLLALNAAIEAARAGEQ 631
           L + +  ++  ++ AVE I  L+ ES  I SVL+VI++IA+QTNLLALNAAIEAARAGEQ
Sbjct: 347 L-QQIDQLSGTISQAVEVIRTLSAESTQIGSVLEVIRSIADQTNLLALNAAIEAARAGEQ 405

Query: 632 GRGFAVVADEVRNLAAKTQTSTEEIRTKIDRLQKETQSVVNCIEEANNTVVRGVATCHSN 691
           GRGFAVVADEVR LA +TQ ST EI+  I+RLQ  +++ V  I ++++     +      
Sbjct: 406 GRGFAVVADEVRLLAQRTQKSTAEIQGMIERLQGHSEAAVKVISDSHSASQMTIEQAGQA 465

Query: 692 TDMLKQIVDMLNELNEMNIQIATATEQQRGVTEEINANITSISDVSASVTVQVGEVNAIV 751
              L  I + L  LN +N  IA+AT QQ  V E+IN N+T  + +S S  +   + +   
Sbjct: 466 GASLTAIGESLRNLNGLNASIASATLQQAHVVEDINQNVTEAAGLSHSTALAAEQSSVAS 525

Query: 752 NELSDEAMELSKRMGQFR 769
             L   + +L   + QF+
Sbjct: 526 AHLRGLSEQLDGLLRQFK 543