Pairwise Alignments

Query, 770 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 715 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  219 bits (558), Expect = 4e-61
 Identities = 144/417 (34%), Positives = 222/417 (53%), Gaps = 16/417 (3%)

Query: 368 GLMMESTHA-------SVQLLSAYTPLDALGLRWALVTEMQ----ADEALADIAKLSDEL 416
           G +  STH         +++L+ + P+   G  W ++ ++        A A  A++  E 
Sbjct: 299 GALASSTHIRSLRTDHQLKVLAPFAPIPE-GKPWGVLLDVPEKVLVGPAEALKAQMDAEN 357

Query: 417 IMKVLIAIVIG---AVIATLAAWMVGNGISKPIRDSISQIQRM-SRDNDLTVRLSEQGSD 472
               L+ + +G   AV+  +  W++   +++PI      ++ + S + DLT RL+    D
Sbjct: 358 TRGTLLELGLGLLAAVVGLILVWLMARSVTRPILGVAHMLEDIASGEGDLTRRLAYDKQD 417

Query: 473 EIRQLAQALNRMLSHLQDTICQFAHTTDKLNSHTQTITHNMTGTRNSVSEQHERTDSVVT 532
           E+ QLA   NR L  LQ  I +   +               T T   + +Q+ + D V T
Sbjct: 418 ELGQLAGWFNRFLDKLQPIIAEVKRSVQDARGTADQSAAIATQTSAGMEQQYRQVDQVAT 477

Query: 533 AVNEMSASITEVSEFAQRAATFVQEANQKGHGGVSVGNELARDMTSINQQMASAVEAIAR 592
           A +EMSA+  +V+  A +AA   ++A+Q    G++V      ++ ++   M++A+  +  
Sbjct: 478 ASHEMSATAQDVARSAAQAAQAARDADQATRDGLTVIEHTTHNIGALASDMSTAMTQVEG 537

Query: 593 LNHESQSIASVLDVIQAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAAKTQTS 652
           L   S+ I SVL+VI+ IAEQTNLLALNAAIEAARAGE GRGFAVVADEVRNLA +TQ S
Sbjct: 538 LAANSEKIGSVLEVIRGIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQES 597

Query: 653 TEEIRTKIDRLQKETQSVVNCIEEANNTVVRGVATCHSNTDMLKQIVDMLNELNEMNIQI 712
            EE R  I+ LQ  T++VV  +  +       V         L+QI D +  +++MN+QI
Sbjct: 598 VEETRLVIEHLQNGTEAVVGSMGNSYRQAQGSVEQVGQAVTALRQIGDAVTVISDMNLQI 657

Query: 713 ATATEQQRGVTEEINANITSISDVSASVTVQVGEVNAIVNELSDEAMELSKRMGQFR 769
           A+A E+Q  V EEIN N+ +I DV+ S++ Q  E   +   L+  A +    M QFR
Sbjct: 658 ASAAEEQSAVAEEINNNVATIRDVTESLSEQANESARVSQALNSLANQQQGLMDQFR 714