Pairwise Alignments

Query, 770 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  224 bits (572), Expect = 9e-63
 Identities = 149/480 (31%), Positives = 249/480 (51%), Gaps = 23/480 (4%)

Query: 297 GNTGQSYLVGSDHLMRSQPRLLLEDASAFIGTLNSLTGDRAAINQIRSKQSAIGLLKVSS 356
           GNT        D ++R      +ED          LT  +  +   R K+     L+   
Sbjct: 180 GNTMSGMSKSMDDMVRLLNSFKIEDTGFVF-----LTNAQGEVQIHRQKEQVKSSLQQIY 234

Query: 357 QAVDKALRGESGLMMESTH---ASVQLLSAYTPLDALGLRWALVTEMQADEALADIAKLS 413
            +   AL  +SG  + ST      V + S Y       + W LV  +   E  A++    
Sbjct: 235 GSGASALLNKSGFNLISTDYQGEEVMVASIYIE----SMDWFLVGTVPVHEVFAEL---- 286

Query: 414 DELIMKVLIAIVIGAVIATLAAWMVGNGISKPIRDSISQIQRMSR-DNDLTVRLSEQGSD 472
           D +  ++++  +  A I       + N I+ PI     +   + R D DL+ R+  +G+D
Sbjct: 287 DAVAQRMMLTTLAVAAIFIFMGIFLANSIAMPINQIAKRFTDLGRGDGDLSQRIEVKGND 346

Query: 473 EIRQLAQALNRMLSHLQDTICQFAHTTDKLNSHTQTITHNMTGTRNSVSEQHERTDSVVT 532
           EI QL++  N  +  +  +I   A T+ +L    + ++     T ++  +Q ++T  VVT
Sbjct: 347 EIAQLSKGFNGFIEKIHQSIKDVAQTSRELQVAAEGVSRKALVTHDNSQQQRDQTIQVVT 406

Query: 533 AVNEMSASITEVSEFAQRAATFVQEANQKGHGGVSVGNELARDMTSINQQMASAVEAIAR 592
           A+N+M A+I+E++  A  AA    +A+     G +V N+    ++ +   + +  + + +
Sbjct: 407 AINQMGATISEIASNAATAAETANQASGNADQGRNVVNKAKEAISRLAHDIENTGKVVEQ 466

Query: 593 LNHESQSIASVLDVIQAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAAKTQTS 652
           L   +Q I S+LD I+ I+EQTNLLALNAAIEAARAG+QGRGFAVVADEVRNLA++T +S
Sbjct: 467 LASTTQEIGSILDAIRGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTASS 526

Query: 653 TEEIRTKIDRLQKETQSVVNCIEEANNTVVRGVATCHSNTDMLKQIVDMLNELNEMNIQI 712
           TEEI+  I++LQ + ++ V+ ++       +GVA       +L  I D ++++++ N Q+
Sbjct: 527 TEEIQKMINQLQNDAKNAVSAMDAGKTVTHQGVAASDEAVQVLMSISDRIHDISDRNTQV 586

Query: 713 ATATEQQRGVTEEINAN---ITSISDVSASVTVQVGEVNAIVNELSDEAMELSKRMGQFR 769
           ATATE+Q  V   IN N   I +I++V+ S   ++ + +  + ELS     L K +G F+
Sbjct: 587 ATATEEQSTVVHTINQNIEEINAINEVTTSTAEELADASKSLRELSG---RLDKLVGNFK 643