Pairwise Alignments

Query, 770 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 547 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  198 bits (504), Expect = 6e-55
 Identities = 119/357 (33%), Positives = 212/357 (59%), Gaps = 3/357 (0%)

Query: 414 DELIMKVLIAIVIGAVIATLAAWMVGNGISKPIRDSISQIQRMSRDNDLTVRLSEQGSDE 473
           D ++ +   A++   ++A L++W++   I  PIR     ++ +++ N L V+  E+G++E
Sbjct: 192 DSVMSQSTFALIGILLVAALSSWLLAGIIVTPIRQLQQTVREIAKGN-LLVKAQEEGNNE 250

Query: 474 IRQLAQALNRMLSHLQDTICQFAH-TTDKLNSHTQTITHNMTGTRNSVSEQHERTDSVVT 532
           I  LA+ +N  ++ L+ T+      +TD  ++ T+  T     + NS  E+ E  + V +
Sbjct: 251 ITLLARDVNATVTQLRQTVESLVRISTDVASASTELATVMTQASVNSDQEKQE-VEQVAS 309

Query: 533 AVNEMSASITEVSEFAQRAATFVQEANQKGHGGVSVGNELARDMTSINQQMASAVEAIAR 592
           AVN++ ++   V++ A  A    Q+ANQ     + +  E  R    +  Q+  A + + +
Sbjct: 310 AVNQLQSTAQSVTDHAHSADGAAQQANQLASQSLRMFEESHRATAKMADQLREAAQVVNQ 369

Query: 593 LNHESQSIASVLDVIQAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAAKTQTS 652
           L  +S+ I +V +VI++I+EQTNLLALNAAIEAARAGE GRGFAVVADEVR LAA+TQTS
Sbjct: 370 LKEQSERIGNVTEVIRSISEQTNLLALNAAIEAARAGESGRGFAVVADEVRMLAARTQTS 429

Query: 653 TEEIRTKIDRLQKETQSVVNCIEEANNTVVRGVATCHSNTDMLKQIVDMLNELNEMNIQI 712
           T+EI+  I+ LQ ++ +  + +  + + + +  +     +  L +I   ++ L ++N Q+
Sbjct: 430 TQEIQAIIEELQNQSNTANSSMHSSLSLLEQNQSLAAKVSASLTEINHSISALGQINAQV 489

Query: 713 ATATEQQRGVTEEINANITSISDVSASVTVQVGEVNAIVNELSDEAMELSKRMGQFR 769
           ATA+E+Q  VT++IN N+++I ++ +     + +  A  +ELSD A +  +++  FR
Sbjct: 490 ATASEEQSQVTKDINRNLSNIYELVSQNVTGITQSAAASHELSDLAEQQHQQLQYFR 546



 Score = 25.8 bits (55), Expect = 0.006
 Identities = 27/133 (20%), Positives = 52/133 (39%), Gaps = 20/133 (15%)

Query: 357 QAVDKALRGESGLMMESTHASVQLLSAYTPLDALGLRWALVTEMQADEALADIAKLSDEL 416
           QA+ + L+ +S     S H+S+ LL                   Q     A ++    E+
Sbjct: 434 QAIIEELQNQSNTANSSMHSSLSLLE------------------QNQSLAAKVSASLTEI 475

Query: 417 IMKVLIAIVIGAVIATLAAWMVGNGISKPIRDSISQIQRMSRDNDLTVRLSEQGSDEIRQ 476
              +     I A +AT +     + ++K I  ++S I  +   N   +  S   S E+  
Sbjct: 476 NHSISALGQINAQVATASEEQ--SQVTKDINRNLSNIYELVSQNVTGITQSAAASHELSD 533

Query: 477 LAQALNRMLSHLQ 489
           LA+  ++ L + +
Sbjct: 534 LAEQQHQQLQYFR 546