Pairwise Alignments

Query, 770 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 706 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  214 bits (546), Expect = 1e-59
 Identities = 135/404 (33%), Positives = 208/404 (51%), Gaps = 18/404 (4%)

Query: 379 QLLSAYTPLDALGLRWALVTEMQADEALADIAKLS------------DELIMKVLIAIVI 426
           Q L  + P+      W ++ EM     + D  +L              EL++  L+ +V+
Sbjct: 306 QWLVVFAPIKVANQNWGIIFEMPRQSVMQDAEQLDILLTEQLERGIRSELMVGTLM-VVV 364

Query: 427 GAVIATLAAWMVGNGISKPIRDSISQIQRMSR-DNDLTVRLSEQGSDEIRQLAQALNRML 485
           G ++ TL A      + +PIR    ++Q +S  + DLT RL    +DEI QLAQ  N  +
Sbjct: 365 GLLVVTLMAMR----LVRPIRAVAERLQDISSGEGDLTQRLQVNSADEIGQLAQGFNLFM 420

Query: 486 SHLQDTICQFAHTTDKLNSHTQTITHNMTGTRNSVSEQHERTDSVVTAVNEMSASITEVS 545
             LQ  I +    T ++ S T+ +   +  TR S   Q +  DSV TA  EM+ +   V 
Sbjct: 421 DKLQPIIRRVVDNTGQVVSTTEQVKSTVESTRRSSEAQFKEVDSVATAAEEMTQTSAHVV 480

Query: 546 EFAQRAATFVQEANQKGHGGVSVGNELARDMTSINQQMASAVEAIARLNHESQSIASVLD 605
           E AQRA     +A +    G  V       M  +  +M  AV  +  L   +  I  +L 
Sbjct: 481 ENAQRAVNAASDAQRAAQTGDEVIRHSQMQMNQLVDRMNLAVPVVEELARNNTGIIEILS 540

Query: 606 VIQAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAAKTQTSTEEIRTKIDRLQK 665
           VI+ I+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA++TQ S  EIR+ I++++ 
Sbjct: 541 VIEGISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQASVGEIRSVINKVEL 600

Query: 666 ETQSVVNCIEEANNTVVRGVATCHSNTDMLKQIVDMLNELNEMNIQIATATEQQRGVTEE 725
            TQ VV  I+ +N T              L ++   ++ +NEM+ QI  A + Q+ V+ +
Sbjct: 601 GTQDVVKAIQGSNETAQATAEQVADAVTQLNRVFSAIHAINEMSHQIVQAAQDQQTVSAQ 660

Query: 726 INANITSISDVSASVTVQVGEVNAIVNELSDEAMELSKRMGQFR 769
           +  ++ +I D+SA +  +      +  +++  + E    +GQF+
Sbjct: 661 VTQSVVNIRDLSAQILSETEASEKVGEQIARLSFEQQTLVGQFK 704