Pairwise Alignments

Query, 770 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  213 bits (543), Expect = 2e-59
 Identities = 129/404 (31%), Positives = 220/404 (54%), Gaps = 5/404 (1%)

Query: 367 SGLMMESTHASVQLLSAYTPLDALGLRWALVTEMQADEALADIAKLSDELIMKVLIAIVI 426
           +G ++ S    V L     P++  G  W L+  +     L  I   +D+L  K+ +A+++
Sbjct: 177 NGNVIFSDKHGVNLTPITRPINFAGQDWQLIGYID----LTAIQANTDQLNWKITLALLV 232

Query: 427 GAVIATLAAWMVGNGISKPIRDSISQIQRMSRDN-DLTVRLSEQGSDEIRQLAQALNRML 485
            A +  +A+  + +   KP+    + +  +S+ N DLT RL+ +  DEI Q+  ++N  +
Sbjct: 233 CASVIIVASVTMLHVSFKPLSRLNTLVANLSQGNGDLTQRLAVESKDEIGQICNSINLFI 292

Query: 486 SHLQDTICQFAHTTDKLNSHTQTITHNMTGTRNSVSEQHERTDSVVTAVNEMSASITEVS 545
             LQ      A ++ +++     +++      N++++  + T+  +TA+ EMSAS   ++
Sbjct: 293 EKLQQMFIDVADSSKEIDRAVVHLSNQARSNLNTLNQHTQETEQAITAIEEMSASAGSIA 352

Query: 546 EFAQRAATFVQEANQKGHGGVSVGNELARDMTSINQQMASAVEAIARLNHESQSIASVLD 605
           + A  AA   +  N+          E    +  +  Q++S  E I R++ +++ I SVL 
Sbjct: 353 QSADDAALLTERTNRYADESKQTVTEAVNSVNGLVNQVSSMAETITRMSEDTKQINSVLQ 412

Query: 606 VIQAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAAKTQTSTEEIRTKIDRLQK 665
           VI AIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA++TQ ST +I   +  L+ 
Sbjct: 413 VIGAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALASRTQQSTSQINDMLATLKT 472

Query: 666 ETQSVVNCIEEANNTVVRGVATCHSNTDMLKQIVDMLNELNEMNIQIATATEQQRGVTEE 725
            T++VV  ++             +   D L  + D + E+N +N  IAT+  +QR VT E
Sbjct: 473 TTENVVKEMDSTRIHCEETAERTNHVMDSLNVVTDSVAEMNNLNTLIATSAMEQRQVTHE 532

Query: 726 INANITSISDVSASVTVQVGEVNAIVNELSDEAMELSKRMGQFR 769
           ++ N+ +I ++   + +   +V ++ NEL + +  LS  +G+FR
Sbjct: 533 VSKNMAAIQEMVRKLNMNAAQVTSVSNELQNTSHALSDVVGRFR 576