Pairwise Alignments

Query, 770 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 716 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  216 bits (551), Expect = 3e-60
 Identities = 203/710 (28%), Positives = 321/710 (45%), Gaps = 60/710 (8%)

Query: 80  AMESLTQAYQAYPVEQVPASSLSALKDY-----YTTQFGQNYQKLNDGQDANPLARLSLL 134
           +M+ L+ A Q++   Q    +L   + +     Y   F ++ Q+L   Q  N   + S  
Sbjct: 46  SMKMLSDAAQSHIESQGEIQTLIIRRQFTDAYQYGNGFSRHMQQLLLNQVENSPFQPSAF 105

Query: 135 SRSAEALQARYIASNPNPLGAKHEWESDSLGNAYDALHQKYHPGIKQYLEQFGLYDV-FM 193
             S        + +NP  LG    +E     NA D   + +           G + + + 
Sbjct: 106 RESIVFQAKTVLQANPGLLGISLVFEP----NALDGKDEIFVGNTALGSNDKGRFALNWT 161

Query: 194 VDNDGHVVYTVFKE--LDFATNLLSGPYKESGLARAYVQAKTLANNQYYLDDFAPYYPSY 251
             N G +   V  E  LD A N  S    ++G         T + +      F P++   
Sbjct: 162 QSNTGQITSIVISENELDSAKNASS--INQNGTRN------TCSRSALKPCVFEPFFSRV 213

Query: 252 EAAASFIST---PIFNGSTRVGVLIFQMPVDEINSIMTFDSRWKENGLGNTGQSYLVGSD 308
               + +++   P+   + RVG L+  + +D + S+    SR    G    G S +  S 
Sbjct: 214 NGQKTLVTSIVFPLLVDNKRVGSLLVDISLDGLQSVSQDTSRKLYEG--QAGISVITPSG 271

Query: 309 HLMRSQPRLLLEDASAFIGT-LNSLTGDRAAINQIRSKQSAIGLLKVSSQAVDKALRGES 367
            L    P + L      +G  LN++  D AA          + LL  +++    +L+GE+
Sbjct: 272 LLAGHSPDVRL------VGKYLNAIDSDDAA--------ELVRLL--NTEPGKHSLKGEA 315

Query: 368 GLMMESTHASVQLLSAYTPLDALGLRWALVTEMQADEALADIAKLSDELIMK----VLIA 423
            +    T   +       P DA    W ++ ++     +     L  +L  +     L+ 
Sbjct: 316 RMKTLVTFEPI-------PDDA---PWGVLLDIPESVLIEPAEVLRRQLDQRNTTGSLVE 365

Query: 424 IVIG---AVIATLAAWMVGNGISKPIRDSISQIQRM-SRDNDLTVRLSEQGSDEIRQLAQ 479
           + +G   A++  L  WM+   ++KPI      ++ + S D +LT+RL+ +  DE+ +L  
Sbjct: 366 LGLGLLAAIVGLLFIWMMARSVTKPILRVAYMLRDIASGDGNLTLRLAYEKQDELGELVA 425

Query: 480 ALNRMLSHLQDTICQFAHTTDKLNSHTQTITHNMTGTRNSVSEQHERTDSVVTAVNEMSA 539
             N +L  LQ TI +   +     +           T N + EQ  +   VVTA  EM+A
Sbjct: 426 WFNSLLDKLQPTIAEVKRSVQAARATADESAAIARQTSNGMEEQSRQVHLVVTASQEMNA 485

Query: 540 SITEVSEFAQRAATFVQEANQKGHGGVSVGNELARDMTSINQQMASAVEAIARLNHESQS 599
           +  +V+  A +AA    +A+Q    G+SV       +  +   M+ A+  +  L   S+ 
Sbjct: 486 TAQDVARSAAQAAKAACDADQATREGLSVIGRTTSSIDHLAADMSEAMSQVESLATHSEK 545

Query: 600 IASVLDVIQAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAAKTQTSTEEIRTK 659
           I  VL+VI++IAEQTNLLALNAAIEAARAGE GRGFAVVADEVRNLA +TQ S EE R  
Sbjct: 546 IGMVLEVIRSIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLARRTQESVEETRIV 605

Query: 660 IDRLQKETQSVVNCIEEANNTVVRGVATCHSNTDMLKQIVDMLNELNEMNIQIATATEQQ 719
           I+ LQ  T+SVV  + ++       V         L QI D +  +  MN+QIA+A E+Q
Sbjct: 606 IEHLQSGTESVVTAMSKSQRLASGSVDQVSQAVTALSQIGDAVTVITSMNLQIASAAEEQ 665

Query: 720 RGVTEEINANITSISDVSASVTVQVGEVNAIVNELSDEAMELSKRMGQFR 769
             V EEIN NI+ I DV+ S++ +  E   I + +   A +    M QFR
Sbjct: 666 NAVAEEINCNISIIRDVTESMSDRASESARISDSIYKLANQQQVLMNQFR 715