Pairwise Alignments

Query, 770 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 645 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  213 bits (542), Expect = 3e-59
 Identities = 172/571 (30%), Positives = 272/571 (47%), Gaps = 50/571 (8%)

Query: 210 FATNLLSGPYKESGLARAYVQAKTLANNQY-YLDDFAPYYPSYEA------AASFISTPI 262
           FA+      Y E+GL R   ++       Y Y+D  A  + + +        A FI   +
Sbjct: 113 FASTETGHYYNENGLDRTLSRSNPKDKWFYGYIDSGAERFINIDIDGATGELALFIDYRV 172

Query: 263 FNGSTRVGVLIFQMPVDEINSIMTFDSRWKENGLGNTGQSYLVGSDHLMRSQPRLLLEDA 322
                 VGV    + + E++ ++       +   G  G+ +LV +D L++  P     DA
Sbjct: 173 EKEGKLVGVAGMGLRMTELSKLI------HDFSFGEHGKVFLVRNDGLIQVHP-----DA 221

Query: 323 SAFIGTLNSLTGDRAAINQIRSKQSAIGLLKVSSQAVDKALRGESGLMMESTHASVQLLS 382
           +         +G R    Q+ +  +A G++            GES      +    + L+
Sbjct: 222 A--------FSGKRQLAEQLGA-DAAKGVMT----------GGESLRSSRFSRDGERYLA 262

Query: 383 AYTPLDALGLRWALVTEMQADEALADIAKLSDELIMKVLIAIVIGAVIATLAAWMV---G 439
              PL    L W LV E+   E  A       ++   V +  +IG  +A ++  +V    
Sbjct: 263 LGLPLR--DLNWTLVAEVPESEIYA-------QMHQAVWLTSLIGGAVALVSLLLVVLLA 313

Query: 440 NGISKPIRD-SISQIQRMSRDNDLTVRLSEQGSDEIRQLAQALNRMLSHLQDTICQFAHT 498
            G+ +PIR  + + +Q  S   DL+ RL +   DE+  LA+  NR L   +  I +   T
Sbjct: 314 RGLVRPIRRVTAALVQIGSGAGDLSHRLDDSRQDELGDLARGFNRFLDSQRSLIGEVLST 373

Query: 499 TDKLNSHTQTITHNMTGTRNSVSEQHERTDSVVTAVNEMSASITEVSEFAQRAATFVQEA 558
           +++L    + +T  +  T      Q E T+ V TAV+EM  ++ +++  A  AA   Q A
Sbjct: 374 SERLRRAVEQVTQVVDNTAERSGRQQEMTEMVATAVHEMGLTVQDIARNAGDAAQASQSA 433

Query: 559 NQKGHGGVSVGNELARDMTSINQQMASAVEAIARLNHESQSIASVLDVIQAIAEQTNLLA 618
             +      V     R +  ++  +  A +A+++L  E  S+  VL VI++I+EQTNLLA
Sbjct: 434 RDEALQAREVVQRSIRGIEGMSGDIGKAADAVSQLADEVASVDEVLAVIRSISEQTNLLA 493

Query: 619 LNAAIEAARAGEQGRGFAVVADEVRNLAAKTQTSTEEIRTKIDRLQKETQSVVNCIEEAN 678
           LNAAIEAARAGE GRGFAVVADEVR LA +TQ ST+E++  I RL+    S V+ ++   
Sbjct: 494 LNAAIEAARAGEMGRGFAVVADEVRTLARRTQLSTDEVQQMIQRLKLGAGSAVSSMQAGQ 553

Query: 679 NTVVRGVATCHSNTDMLKQIVDMLNELNEMNIQIATATEQQRGVTEEINANITSISDVSA 738
                GV +       L  I D +  +++MN Q+ATATE+Q  VTEEIN  +  ISD++ 
Sbjct: 554 QATGSGVESSQRTGASLSAITDQVEHISDMNHQVATATEEQSAVTEEINRTVQGISDLAR 613

Query: 739 SVTVQVGEVNAIVNELSDEAMELSKRMGQFR 769
               +V         L   A +L+++MG FR
Sbjct: 614 ETAAEVQGCREECQALRGLADDLARQMGGFR 644