Pairwise Alignments

Query, 770 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 636 a.a., hypothetical protein from Alteromonas macleodii MIT1002

 Score =  211 bits (537), Expect = 1e-58
 Identities = 135/422 (31%), Positives = 218/422 (51%), Gaps = 10/422 (2%)

Query: 351 LLKVSSQAVDKALRGESGLMMESTHASVQL-LSAYTPLDALGLRWALVTEMQADEALADI 409
           L  +S  +    L    G  M ++ A+    L A T ++  G  W +V ++   E  A +
Sbjct: 221 LASISDSSTSGQLLNRQGFAMATSDAAGDTQLFASTYVEKAG--WYVVAQVPEHELYASL 278

Query: 410 AKLSDELIMKVLIAIVIGAVIATLAAWMVGNGISKPIRDSISQIQRMSR-DNDLTVRLSE 468
              S ++I   + A+VI    A +  W+ G  ++KP+       Q++ R   DL  R+  
Sbjct: 279 NAGSRQII---IWALVIAGAFALIGIWLAGT-LTKPLESLADVFQQLGRGQGDLRSRIPM 334

Query: 469 QGSDEIRQLAQALNRMLSHLQDTICQFAHTTDKLNSHTQTITHNMTGTRNSVSEQHERTD 528
               EI +L +  N  + HL  TI Q A T+  L +  Q +      T NS   Q ++T 
Sbjct: 335 PEQKEIARLVEGFNNFIDHLHGTISQVAKTSHALKASAQDVAKQSHQTENSTKSQRDQTL 394

Query: 529 SVVTAVNEMSASITEVSEFAQRAATFVQEANQKGHGGVSVGNELARDMTSINQQMASAVE 588
               A+ EM +++ EV++ A  AA     A      G  +       +  ++ Q+     
Sbjct: 395 QAAAALTEMGSTVNEVAQSATHAAQNANMATTNSAHGREITQRAVHAINGLSGQIQDVSR 454

Query: 589 AIARLNHESQSIASVLDVIQAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAAK 648
            I  L+  + +I  +LD I+ I+EQTNLLALNAAIEAARAG+ GRGF+VVADEVR LA +
Sbjct: 455 VIQSLDEHTAAIGGILDTIRGISEQTNLLALNAAIEAARAGDHGRGFSVVADEVRTLAQR 514

Query: 649 TQTSTEEIRTKIDRLQKETQSVVNCIEEANNTVVRGVATCHSNTDMLKQIVDMLNELNEM 708
              +T+EI+ KID+ Q++++S V+ +E +       V   +    +L+ I + +  +N++
Sbjct: 515 AAQATDEIQVKIDKFQQDSKSAVSQMESSRARTTDVVTATNEIDKLLQDIAEEIAHINDV 574

Query: 709 NIQIATATEQQRGVTEEINANITSISDVSASVTVQVGEVNAIVNELSDE-AMELSKRMGQ 767
           N Q+ATATE+Q  V E+I+ NI  IS  S+  T+   ++   V++  DE A ELS  + +
Sbjct: 575 NTQVATATEEQATVVEDISRNINDIS-ASSEETLNATKILVSVSDKLDELAQELSSEVSR 633

Query: 768 FR 769
           F+
Sbjct: 634 FK 635