Pairwise Alignments

Query, 307 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 322 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  157 bits (397), Expect = 3e-43
 Identities = 97/291 (33%), Positives = 153/291 (52%), Gaps = 6/291 (2%)

Query: 12  MDRLTAMRSFIEVANTASFTQAADNLNLSRLQVSRHVQEIEDWLKQRLLHRTTRRVSLTA 71
           MD L  MR+F  VA   SFT AA  L+ +   VSR V  +E  L+ RLL+RTTRR++LT 
Sbjct: 1   MDTLQNMRAFSCVAEAGSFTAAAVQLDTTTANVSRAVSNLEAHLQTRLLNRTTRRIALTE 60

Query: 72  AGEEALQRCEQILHQTMELEMRALEQSGALRGSIRISAPIGLTQNMLLDAVQAFTDLHPQ 131
           AG+  L RCEQIL    E E  A +      G +++    G+ Q+ ++DA+  +   HP 
Sbjct: 61  AGKRYLLRCEQILAYVEEAEAEASDAHARPAGQLKVHTMTGIGQHFVIDAIARYRRTHPD 120

Query: 132 VHFDVLASDRFSQLVDERVDIALRFTQQ-PDENLIARRLLEVGMVVCATQEYLAQHAPIE 190
           V FD+  ++R   L+DE  D+++    + PD   +++RL     + CA+ +Y+      +
Sbjct: 121 VTFDLTLANRVPDLLDEGYDVSIVLASELPDSGFVSQRLGITYSIACASPDYVKAKGCAQ 180

Query: 191 LPQDLTHHNCLVHISG----NKWDFVKNNEQFSVLVNGN-IRANDMGTLCRAALNHKGII 245
            PQDL +H CL  +S     +KW F     Q SV +N +    N    +  A  +  G+ 
Sbjct: 181 RPQDLLNHACLRLVSPVIQLDKWTFNGPEGQESVAINTSPFLVNSADAMKTAITSGMGVG 240

Query: 246 RLPCDLANPLLRAGQLQALLPDYYLPSSSIWAVYLSRSYQTPLVRQFIDFL 296
            LP   A   LR G L  ++P+Y     +++A+Y SR Y    ++ ++++L
Sbjct: 241 LLPVYAAIEGLRNGTLVRVMPNYRSQELNLYAIYPSRQYLDAKIKTWVEYL 291