Pairwise Alignments

Query, 307 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., transcriptional regulator from Pseudomonas simiae WCS417

 Score =  155 bits (392), Expect = 1e-42
 Identities = 97/299 (32%), Positives = 151/299 (50%), Gaps = 7/299 (2%)

Query: 12  MDRLTAMRSFIEVANTASFTQAADNLNLSRLQVSRHVQEIEDWLKQRLLHRTTRRVSLTA 71
           M++L  +R+F+ V   +SFTQA ++L L R  VS HVQ +E  L  RLL RTTR+V +T 
Sbjct: 1   MNKLELLRTFVRVTELSSFTQAGESLGLPRSTVSEHVQALEQLLGTRLLQRTTRKVQVTQ 60

Query: 72  AGEEALQRCEQILHQTMELEMRALEQSGALRGSIRISAPIGLTQNMLLDAVQAFTDLHPQ 131
            G    +R + +L    ELE    +    L G IR+  P  + + M+L  +  F + HP 
Sbjct: 61  DGRVLYERSKDLLSHMEELEGLFRQDEAQLTGRIRVDMPNVMARGMILPHLPLFMERHPL 120

Query: 132 VHFDVLASDRFSQLVDERVDIALRFTQQPDENLIARRLLEVGMVVCATQEYLAQHAPIEL 191
           +  ++ +SDR   L+ E  D  LR   QPD+ ++ARR+  + MV CA+  YL ++   + 
Sbjct: 121 IQMEISSSDRQVDLIAEGFDCVLRVGAQPDQTVVARRVCSMPMVNCASPAYLQRYGVPQT 180

Query: 192 PQDLTHHNCLVH------ISGNKWDFVKNNEQFSVLVNGNIRANDMGTLCRAALNHKGII 245
             DL  H  LVH         + +++    +   V + G +  N       A L   GI 
Sbjct: 181 LSDLADHQ-LVHYVRPLGARSSGFEYQSGGKVQRVPMAGRVTVNSTDAYQAACLGGFGIT 239

Query: 246 RLPCDLANPLLRAGQLQALLPDYYLPSSSIWAVYLSRSYQTPLVRQFIDFLAERWQEDL 304
           ++P      LL +G+L ++LPDY  P   +  +Y  + +    VR F+D+LA   Q  L
Sbjct: 240 QVPLLGIRALLASGELVSVLPDYPAPPLDVSLLYAGQRHLPLRVRVFMDWLAATLQAHL 298