Pairwise Alignments

Query, 307 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  157 bits (397), Expect = 3e-43
 Identities = 99/299 (33%), Positives = 150/299 (50%), Gaps = 10/299 (3%)

Query: 12  MDRLTAMRSFIEVANTASFTQAADNLNLSRLQVSRHVQEIEDWLKQRLLHRTTRRVSLTA 71
           MD   AM  +++V  T S T AA    +S   V  H++ +E  L   LL RTTR+ SLT 
Sbjct: 1   MDLFQAMSVYVKVVETGSMTAAAQACGMSTTMVGNHLRALEQRLGVSLLKRTTRKQSLTE 60

Query: 72  AGEEALQRCEQILHQTMELEMRALE-QSGALRGSIRISAPIGLTQNMLLDAVQAFTDLHP 130
            G +  QRC ++L    + E  A +  S   +G++RI+AP       L  A+  F+  +P
Sbjct: 61  FGGQYYQRCLEVLGLVADSEQLAEQAHSDVPKGTLRITAPPVFGTERLTPALSEFSRRYP 120

Query: 131 QVHFDVLASDRFSQLVDERVDIALRFTQQPDENLIARRLLEVGMVVCATQEYLAQHAPIE 190
            ++  V+ S+    LVD   D A+R  +    +LIAR +    + +CA+ +YLA+    +
Sbjct: 121 LINLYVVLSNERMDLVDSGFDAAIRLGELETSSLIARPMQAYTLTLCASPDYLARRGTPQ 180

Query: 191 LPQDLTHHNCLVHI---------SGNKWDFVKNNEQFSVLVNGNIRANDMGTLCRAALNH 241
            P DL HH+CL            +   W     + +  V V+G++  N    L +AA+N 
Sbjct: 181 TPDDLQHHDCLAFAYPASDNWRDADKLWRMTGESGEVEVPVSGSLTINSSQGLRQAAVNG 240

Query: 242 KGIIRLPCDLANPLLRAGQLQALLPDYYLPSSSIWAVYLSRSYQTPLVRQFIDFLAERW 300
            GII L   L  P L +G+L ALL  Y LPS  +  +Y    Y+ P +R F+DF  E+W
Sbjct: 241 MGIIMLADALVQPDLESGKLVALLTTYRLPSRPMHLLYGQDRYRLPKLRAFVDFAMEKW 299