Pairwise Alignments

Query, 307 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  206 bits (524), Expect = 5e-58
 Identities = 120/293 (40%), Positives = 165/293 (56%), Gaps = 4/293 (1%)

Query: 18  MRSFIEVANTASFTQAADNLNLSRLQVSRHVQEIEDWLKQRLLHRTTRRVSLTAAGEEAL 77
           MR F+ V ++ S + AAD L+LSR  V+R+V E+E W   RLLHRTTRR+SLTAAGEE L
Sbjct: 1   MRVFVNVVDSGSLSAAADKLDLSRPVVTRYVAELEQWTGARLLHRTTRRLSLTAAGEELL 60

Query: 78  QRCEQILHQTMELEMRALEQSGALRGSIRISAPIGLTQNMLLDAVQAFTDLHPQVHFDVL 137
            RC Q+L  T +++      + A RG +RI+A     Q  L  AV  +  L+P V  D++
Sbjct: 61  PRCRQVLELTGDMQAAVRHPAEAPRGQLRITASTSFAQAQLAGAVADYVRLYPGVAVDLV 120

Query: 138 ASDRFSQLVDERVDIALRFTQQPDENLIARRLLEVGMVVCATQEYLAQHAPIELPQDLTH 197
             DR   LVDER+D+A+R   + D NLIARRL +   VVCA+  YL +       ++L  
Sbjct: 121 LLDRSVNLVDERIDLAIRVAAEIDPNLIARRLTDCRSVVCASPGYLKEQGRPLRVEELAQ 180

Query: 198 HNCLVH--ISGNKWDFVK--NNEQFSVLVNGNIRANDMGTLCRAALNHKGIIRLPCDLAN 253
            NCL H     + W+F +  + E  SV V GN+  ND  +L   A    GI  LP  L +
Sbjct: 181 RNCLTHSYFGRSLWNFTRKEDGEPVSVAVGGNVSTNDAASLMYLARAGAGIAMLPTYLTS 240

Query: 254 PLLRAGQLQALLPDYYLPSSSIWAVYLSRSYQTPLVRQFIDFLAERWQEDLLW 306
            LL+ G+L  L  D+      ++AVY SR +    +R  +DFLA R+ E   W
Sbjct: 241 ELLQKGELVRLFTDFEPQVVGMYAVYASRKHMPATLRTMLDFLAARFTEVPAW 293