Pairwise Alignments

Query, 307 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 315 a.a., LysR family transcriptional regulator from Pseudomonas putida KT2440

 Score =  163 bits (412), Expect = 6e-45
 Identities = 103/299 (34%), Positives = 156/299 (52%), Gaps = 6/299 (2%)

Query: 12  MDRLTAMRSFIEVANTASFTQAADNLNLSRLQVSRHVQEIEDWLKQRLLHRTTRRVSLTA 71
           MD L  MR+F  VA   SFT AA  L+ +   VSR V  +E  L+ RLL+RTTRR++LT 
Sbjct: 1   MDTLQNMRAFSCVAQLGSFTAAAAQLDTTTANVSRAVSNLEAHLQTRLLNRTTRRIALTE 60

Query: 72  AGEEALQRCEQILHQTMELEMRALEQSGALRGSIRISAPIGLTQNMLLDAVQAFTDLHPQ 131
           AG+  L RCEQIL    E E  A +      G +++ +  G+ Q+ ++DA+  + + HP 
Sbjct: 61  AGKRYLMRCEQILTYVEEAEAEASDAHARPAGQLKVHSMTGVGQHFVVDAIARYRETHPD 120

Query: 132 VHFDVLASDRFSQLVDERVDIALRF-TQQPDENLIARRLLEVGMVVCATQEYLAQHAPIE 190
           V FD+  ++R   L+DE  D+++   T+ PD   +++RL     +VCA+  Y+AQH    
Sbjct: 121 VTFDLTMANRVPDLLDEGYDVSIVLATELPDSGFVSQRLGITYSIVCASPAYIAQHGVAH 180

Query: 191 LPQDLTHHNCLVHISG----NKWDFVKNNEQFSV-LVNGNIRANDMGTLCRAALNHKGII 245
            P DL  H CL  +S      KW F     Q  V + +     N    +  A  +  G+ 
Sbjct: 181 KPADLLKHACLRMVSPVIPLEKWLFDGPEGQEMVNITSSPFMVNTADAMKTAIRSGMGVG 240

Query: 246 RLPCDLANPLLRAGQLQALLPDYYLPSSSIWAVYLSRSYQTPLVRQFIDFLAERWQEDL 304
            LP   A   LR G L  +LP+Y L   +++A+Y SR Y    ++ ++++L     E L
Sbjct: 241 VLPIYSAIEGLRDGSLVRVLPEYRLQELNLYAIYPSRQYLDAKIKTWVEYLRNSLPEIL 299