Pairwise Alignments

Query, 307 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., D-malate degradation protein R from Alteromonas macleodii MIT1002

 Score =  154 bits (389), Expect = 2e-42
 Identities = 89/299 (29%), Positives = 161/299 (53%), Gaps = 4/299 (1%)

Query: 12  MDRLTAMRSFIEVANTASFTQAADNLNLSRLQVSRHVQEIEDWLKQRLLHRTTRRVSLTA 71
           MD+L+ +++F  VAN  SFT+AA+ L+ S   VS++V E+E  L  RL +RTTR++ LT 
Sbjct: 1   MDKLSLLKTFCVVANEGSFTKAAEKLDTSNQLVSKYVAELEKQLDTRLFNRTTRKIHLTE 60

Query: 72  AGEEALQRCEQILHQTMELEMRALEQSGALRGSIRISAPIGLTQNMLLDAVQAFTDLHPQ 131
           AG++ LQ    IL    ++E +    +  ++G + +SAP+  +   L  A+ AF   HP 
Sbjct: 61  AGQQCLQHANHILESVTDMESQLGLLNTEVKGVLHVSAPVSFSTLHLASALSAFQQAHPH 120

Query: 132 VHFDVLASDRFSQLVDERVDIALRFTQQPDENLIARRLLEVGMVVCATQEYLAQHAPIEL 191
           V  ++  +DR   ++DE  D+A+R     + +L+A+++  + + +CA+  YL ++   + 
Sbjct: 121 VSINLQLNDRKIDVIDEGFDVAIRAGHLANSSLVAKKITTIKLALCASPAYLEKYGTPQH 180

Query: 192 PQDLTHHNCL----VHISGNKWDFVKNNEQFSVLVNGNIRANDMGTLCRAALNHKGIIRL 247
           P +L   + L    V+   +K   +   +  +  V   + AN+   L   A   +G +  
Sbjct: 181 PAELKPEHYLEYSYVNYDNDKSVLIAALKANAQTVTPKLTANNGEVLTNVAKQGEGYVLQ 240

Query: 248 PCDLANPLLRAGQLQALLPDYYLPSSSIWAVYLSRSYQTPLVRQFIDFLAERWQEDLLW 306
           P  +A   L+ G+L ++L D+   + S++AVY  R   +  +R FIDFL+  ++    W
Sbjct: 241 PTFIAGEALKNGELVSILDDFVPQAISLYAVYPHRKLISNKLRVFIDFLSSYFESTPYW 299