Pairwise Alignments

Query, 298 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 505 a.a., amino acid ABC transporter ATPase from Pseudomonas simiae WCS417

 Score =  108 bits (271), Expect = 2e-28
 Identities = 74/241 (30%), Positives = 119/241 (49%), Gaps = 27/241 (11%)

Query: 50  WTLIFTPRADGSLPYFLQGLGATLRLSLWGMVLALVLGSLIGIARSQKAWFVRLPANAFV 109
           W  +F    D     F +     ++LS    VL++ LG L+ +A+  +   + +PA  ++
Sbjct: 5   WNYMFGLLGDAE---FWRATWTVIKLSTLTWVLSIGLGFLLALAKQSRHGLLSVPARGYI 61

Query: 110 QLVRNIPPLVFVFIFYFFISNQLIPLLGLDELLRYHTAEVHPLITWLFGPARLWENLLSG 169
            L R++P LV +     FI N    L G   +L                    W  LL+ 
Sbjct: 62  WLFRSLPLLVLLI----FIYNLPQALPGTSAILA----------------DPFWSGLLAL 101

Query: 170 VLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLGLPTWGKYRYVIAPQVLTAITPALAG 229
           V+C     +AY+AEI R GL +IP+GQ EAA +LGL  +G    V+ PQ L    P+LA 
Sbjct: 102 VIC----ETAYVAEIHRGGLLSIPKGQAEAARALGLKFFGTQWRVVIPQALRVALPSLAN 157

Query: 230 QTISLIKDTSIISLISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVLCLTLSMLFKQVE 289
           + IS++K TS++S+IS+ E+  VG  + + + L+ E    V   Y+ +      L K++E
Sbjct: 158 EYISIVKLTSLVSVISLTEILMVGQRLYSQNFLVIETMAAVAFFYVFIVTVFDFLLKRLE 217

Query: 290 K 290
           +
Sbjct: 218 R 218