Pairwise Alignments

Query, 298 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 319 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  129 bits (324), Expect = 9e-35
 Identities = 85/224 (37%), Positives = 119/224 (53%), Gaps = 29/224 (12%)

Query: 68  GLGATLRLSLWGMVLALVLGSLIGIARSQKAWFVRLPANAFVQLVRNIPPLVFVFIFYFF 127
           GL  TL LS+   +L L++G   G+ R      +R  +  +V+LVR  P LV +FIFYFF
Sbjct: 120 GLWTTLWLSVVSGILGLIIGLATGLCRLSSNPTLRDLSTIYVELVRGTPLLVQIFIFYFF 179

Query: 128 ISNQLIPLLGLDELLRYHTAEVHPLITWLFGPARLWENLLSGVLCIGLLSSAYIAEIVRA 187
           I   L        L R                        +G+  + L + AY+AEIVRA
Sbjct: 180 IGTVL-------NLSRE----------------------FAGIAALSLFTGAYVAEIVRA 210

Query: 188 GLANIPQGQWEAADSLGLPTWGKYRYVIAPQVLTAITPALAGQTISLIKDTSIISLISIQ 247
           G+ +I +GQ EAA SLGL      R+V+ PQ    + P LAGQ ISL+KDTS++S+I+I 
Sbjct: 211 GVQSITRGQNEAARSLGLSASQSMRHVVLPQAFKRVLPPLAGQFISLVKDTSLVSVIAIT 270

Query: 248 ELTFVGSEIANSSGLIFEIWLIVGAAYLVLCLTLSMLFKQVEKR 291
           EL   G E+  +S   FEI   V   YL++ L LS +  ++E+R
Sbjct: 271 ELLKSGREVITTSFSPFEILFCVAGLYLLINLPLSKMASRLERR 314