Pairwise Alignments

Query, 298 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 220 a.a., amino acid ABC transporter permease from Pseudomonas simiae WCS417

 Score =  124 bits (311), Expect = 2e-33
 Identities = 76/252 (30%), Positives = 123/252 (48%), Gaps = 37/252 (14%)

Query: 40  IHYQWHWREAWTLIFTPRADGSLPYFLQGLGATLRLSLWGMVLALVLGSLIGIARSQKAW 99
           ++YQ ++   W            P  L GLG  L L+L  + +  V+G ++  A   K  
Sbjct: 1   MNYQLNFAAVWR---------DFPSLLAGLGLGLELALLSIAIGCVIGLMMAFAMLSKHR 51

Query: 100 FVRLPANAFVQLVRNIPPLVFVFIFYFFISNQLIPLLGLDELLRYHTAEVHPLITWLFGP 159
            +R+ A+ +V +VRN P LV + + YF + N  I L                        
Sbjct: 52  ALRVFASVYVTVVRNTPILVLILLIYFALPNLGIRL------------------------ 87

Query: 160 ARLWENLLSGVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLGLPTWGKYRYVIAPQV 219
               + + S ++ + L + AY+ E+ RAGL NIP+G  EA  ++GL  W    Y+  P +
Sbjct: 88  ----DKIPSFIITLSLYAGAYLTEVFRAGLLNIPKGLREAGLAIGLGEWRIRAYITVPVM 143

Query: 220 LTAITPALAGQTISLIKDTSIISLISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVLCL 279
           L  + PAL+   ISL KDTS+ + I++ ELT+   +I   S  + E WL+  A Y+  C 
Sbjct: 144 LRNVLPALSNNFISLFKDTSLAAAIAVPELTYYARKINVESYRVIETWLVTTALYVAACY 203

Query: 280 TLSMLFKQVEKR 291
            ++ML + +E+R
Sbjct: 204 LIAMLLRYLEQR 215