Pairwise Alignments

Query, 298 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 248 a.a., amino acid ABC transporter permease from Pseudomonas simiae WCS417

 Score =  120 bits (301), Expect = 3e-32
 Identities = 77/255 (30%), Positives = 135/255 (52%), Gaps = 22/255 (8%)

Query: 40  IHYQWHWREAWTLIFTPRADGS---LPYFLQGLGATLRLSLWGMVLALVLGSLIGIARSQ 96
           ++Y W W     + F     GS   L +++ GLG T+ +++   ++AL+LGS++G+ R+ 
Sbjct: 1   MNYNWDWG----VFFKSTGVGSETYLDWYIAGLGWTIAIAVVAWIIALLLGSILGVMRTV 56

Query: 97  KAWFVRLPANAFVQLVRNIPPLVFVFIFYFFISNQLIPLLGLDELLRYHTAEVHPLITWL 156
               V   A  +V+L RN+P LV +FI+YF     L+P +    L  ++  +++P  +  
Sbjct: 57  PNRIVSGIATCYVELFRNVPLLVQLFIWYF-----LVPDMLPQNLQDWYKQDLNPTTS-- 109

Query: 157 FGPARLWENLLSGVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLGLPTWGKYRYVIA 216
                     LS V+C+GL ++A + E VR G+  +P+GQ  AA ++G      Y  V+ 
Sbjct: 110 --------AYLSVVVCLGLFTAARVCEQVRTGIQALPRGQESAARAMGFKLPQIYWNVLL 161

Query: 217 PQVLTAITPALAGQTISLIKDTSIISLISIQELTFVGSEIANSSGLIFEIWLIVGAAYLV 276
           PQ    I P L  + +++ K++S+ SLI + EL     + A  S  +FE + +    Y  
Sbjct: 162 PQAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFT 221

Query: 277 LCLTLSMLFKQVEKR 291
           L ++L +L + VEK+
Sbjct: 222 LNMSLMLLMRLVEKK 236