Pairwise Alignments

Query, 298 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 236 a.a., Glutamate/aspartate ABC transporter, permease protein GltK (TC 3.A.1.3.4) from Variovorax sp. SCN45

 Score =  117 bits (292), Expect = 3e-31
 Identities = 77/233 (33%), Positives = 124/233 (53%), Gaps = 34/233 (14%)

Query: 66  LQGLGATLRLSLWGMVLALVLGSLIGIARSQKAWFVRLPANAFVQLVRNIPPLVFVFIFY 125
           L GL  TL L+  G+VLAL LG ++G+AR     ++R P   FV +VR +P L+ +F  Y
Sbjct: 22  LGGLMLTLLLASCGLVLALPLGIVLGLARVSPWRWLRWPVTGFVFVVRGLPLLMVIFWAY 81

Query: 126 FFISNQLIPLLGLDELLRYHTAEVHPLITWLFGPARLWENLLSGVLCIGLLSSAYIAEIV 185
           FF+                      P +T +       +   + ++ + +  +AY+AEIV
Sbjct: 82  FFL----------------------PSVTGV-----KTDQFTTMLIALVVFDAAYLAEIV 114

Query: 186 RAGLANIPQGQWEAADSLGLPTWGKYRYVIAPQVLTAITPALAGQTISLIKDTSIISLIS 245
           RAG+  +P+GQ E A +LGL      R V+ PQ L ++ P+L  Q +S IK+TS+  +I 
Sbjct: 115 RAGIQGLPRGQMETARALGLGYGRAMRLVVLPQALRSMLPSLVNQFVSTIKETSLGYIIG 174

Query: 246 IQELTFVGSEIANSSGLIF----EIWLIVGAAYLVLCLTLSMLFKQVEKRSLR 294
           + E++F+ ++I      +F    +I+LI+G  Y +LC  LS     +E+R  R
Sbjct: 175 LAEVSFIATQINTQ---VFTKPAQIYLILGGTYFILCFGLSRFAYWLERRLAR 224