Pairwise Alignments

Query, 298 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 229 a.a., Glutamate/aspartate ABC transporter, permease protein GltK (TC 3.A.1.3.4) from Variovorax sp. SCN45

 Score =  116 bits (291), Expect = 4e-31
 Identities = 73/216 (33%), Positives = 114/216 (52%), Gaps = 20/216 (9%)

Query: 63  PYFLQGLGATLRLSLWGMVLALVLGSLIGIARSQKAWFVRLPANAFVQLVRNIPPLVFVF 122
           PY LQGL  T  L    M   + LG+L+ I R      V      +V L R+IP ++ + 
Sbjct: 15  PYLLQGLQMTAFLVAASMAAGMGLGTLLAITRIFAPRPVAALVAGYVNLFRSIPLILTIL 74

Query: 123 IFYFFISNQLIPLLGLDELLRYHTAEVHPLITWLFGPARLWENLLSGVLCIGLLSSAYIA 182
             YF     L+P++     LR  T + +  +    GP      + + ++   L  SAY  
Sbjct: 75  WIYF-----LMPVV-----LRSVTGDPNLSV----GP------IYAALVAFVLAESAYYC 114

Query: 183 EIVRAGLANIPQGQWEAADSLGLPTWGKYRYVIAPQVLTAITPALAGQTISLIKDTSIIS 242
           EI+RAG+ ++  GQ +AA SLG+  W   R+VI PQ    +TP+L  QTI+L+KDTS++ 
Sbjct: 115 EIIRAGIGSVRAGQMQAAQSLGMSPWQAMRHVILPQAFRNMTPSLINQTIALLKDTSLVY 174

Query: 243 LISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVLC 278
           +IS+ +     S++    G + E++++V   YLVLC
Sbjct: 175 VISLNDFLGAASKVGQRDGRVVEVYILVAVVYLVLC 210