Pairwise Alignments

Query, 298 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 259 a.a., Glutamate/aspartate ABC transporter, permease protein GltK (TC 3.A.1.3.4) from Variovorax sp. SCN45

 Score =  113 bits (283), Expect = 4e-30
 Identities = 82/248 (33%), Positives = 131/248 (52%), Gaps = 35/248 (14%)

Query: 47  REAWTLIFTPRADGSLPYF-LQGLGATLRLSLWGMVLALVLGSLIGIARSQKAWFVRLPA 105
           R+ W L+      G  P   L G+ ATL LS+ G+VLA  L  L+ +AR      +R PA
Sbjct: 9   RDNWLLLLV----GQYPSGPLGGIVATLILSVLGIVLAFPLSVLLALARLSPWRLLRWPA 64

Query: 106 NAFVQLVRNIPPLVFVFIFYFFISNQLIPLLGLDELLRYHTAEVHPLITWLFGPARLWEN 165
              V +VR +P L+ +   YF     L+P+L   E+  + T                   
Sbjct: 65  TVLVYVVRGVPLLMVILWVYF-----LVPILIGREVSGFTT------------------- 100

Query: 166 LLSGVLC-IGLLSSAYIAEIVRAGLANIPQGQWEAADSLGLPTWGKYRYVIAPQVLTAIT 224
               +LC + +   AY++E+VRAG+ ++P+GQ EAA +LG    G   +VI PQ L  + 
Sbjct: 101 ----MLCTLVIYEGAYLSEVVRAGILSLPKGQSEAARALGHSHLGTMWFVILPQALYNML 156

Query: 225 PALAGQTISLIKDTSIISLISIQELTFVGSEIANS-SGLIFEIWLIVGAAYLVLCLTLSM 283
           P++  Q IS IK+T++  +I++QELTF  ++I N      F+++ I+   Y V+C +L+ 
Sbjct: 157 PSMLSQFISTIKETTLGYVINVQELTFAANQINNQLLTKPFQVFFILALTYYVVCFSLTQ 216

Query: 284 LFKQVEKR 291
           L + +E+R
Sbjct: 217 LAQWLERR 224