Pairwise Alignments

Query, 298 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 243 a.a., amino acid ABC transporter permease from Variovorax sp. OAS795

 Score =  117 bits (293), Expect = 3e-31
 Identities = 78/255 (30%), Positives = 127/255 (49%), Gaps = 37/255 (14%)

Query: 44  WHWREAWTLIFTPRADGSLPYFLQGL----GATLRLSLWGMVLALVLGSLIGIARS--QK 97
           W W+     +F     G  P + Q +    G T+ ++L  +++ALVLGSLIGI R+    
Sbjct: 5   WDWQ-----VFLQDPGGKYPTYWQWMLSAWGWTVSVALLALIVALVLGSLIGIIRTLPNS 59

Query: 98  AWFVRLPANAFVQLVRNIPPLVFVFIFYFFISNQLIPLLGLDELLRYHTAEVHPLITWLF 157
            W VRL  NA+V+L RNIP LV +F++Y  I   +  + G+   +               
Sbjct: 60  PWLVRL-GNAWVELFRNIPLLVQIFLWYHVIPALVPVMKGVPSFVLV------------- 105

Query: 158 GPARLWENLLSGVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLGLPTWGKYRYVIAP 217
                       VL +G  +SA IAE VR+G+  +P+GQ  A  ++G  T   YRYVI P
Sbjct: 106 ------------VLALGFFTSARIAEQVRSGIQALPKGQRYAGMAVGFTTPQYYRYVILP 153

Query: 218 QVLTAITPALAGQTISLIKDTSIISLISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVL 277
                I P L  +T+++ K++S+   +S+ ELT    +    +    E++L V A Y++ 
Sbjct: 154 MAYRIIIPPLTSETMNIFKNSSVAFAVSVTELTMFAMQAQEETSRGIEVYLAVTALYVIS 213

Query: 278 CLTLSMLFKQVEKRS 292
              ++ +   +EK++
Sbjct: 214 AFAINRIMAYIEKKT 228