Pairwise Alignments

Query, 298 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 320 a.a., Amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  135 bits (340), Expect = 1e-36
 Identities = 89/224 (39%), Positives = 119/224 (53%), Gaps = 29/224 (12%)

Query: 68  GLGATLRLSLWGMVLALVLGSLIGIARSQKAWFVRLPANAFVQLVRNIPPLVFVFIFYFF 127
           GL  TL +S+    L LV+G   G+ R      +R  +  +V+LVR  P LV +FIFYFF
Sbjct: 121 GLWTTLWISVVSGALGLVIGLFAGLCRLSNNPTLRDLSTVYVELVRGTPLLVQIFIFYFF 180

Query: 128 ISNQLIPLLGLDELLRYHTAEVHPLITWLFGPARLWENLLSGVLCIGLLSSAYIAEIVRA 187
           I   L        L R                        +GV  + L + AY+AEIVRA
Sbjct: 181 IGTVL-------NLSRE----------------------FAGVAALALFTGAYVAEIVRA 211

Query: 188 GLANIPQGQWEAADSLGLPTWGKYRYVIAPQVLTAITPALAGQTISLIKDTSIISLISIQ 247
           G+ +I +GQ EAA SLGL      R+VI PQ    + P LAGQ ISL+KDTS++S+I+I 
Sbjct: 212 GVQSIAKGQNEAARSLGLNAGQSMRHVILPQAFKRVLPPLAGQFISLVKDTSLVSVIAIT 271

Query: 248 ELTFVGSEIANSSGLIFEIWLIVGAAYLVLCLTLSMLFKQVEKR 291
           ELT  G E   +S   FEIW  V   YL++ L LS +  ++E+R
Sbjct: 272 ELTKSGREAITTSFSTFEIWFCVAGLYLLINLPLSHIASRLERR 315