Pairwise Alignments

Query, 298 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 218 a.a., Amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  105 bits (263), Expect = 7e-28
 Identities = 63/230 (27%), Positives = 109/230 (47%), Gaps = 28/230 (12%)

Query: 62  LPYFLQGLGATLRLSLWGMVLALVLGSLIGIARSQKAWFVRLPANAFVQLVRNIPPLVFV 121
           LP   +    T+ ++L G  +A+VLG  + I R     ++  P    ++ +R+ P L+ V
Sbjct: 13  LPELFRAALNTIGVTLLGFAIAIVLGLFLAIGRRSARIWISWPIGGVIEFIRSTPLLIQV 72

Query: 122 FIFYFFISNQLIPLLGLDELLRYHTAEVHPLITWLFGPARLWENLLSGVLCIGLLSSAYI 181
           +  Y+ + N  + L  +                              GVL IGL  + Y+
Sbjct: 73  YFLYYVLPNYGVSLTAMQV----------------------------GVLGIGLHYACYL 104

Query: 182 AEIVRAGLANIPQGQWEAADSLGLPTWGKYRYVIAPQVLTAITPALAGQTISLIKDTSII 241
           AE+ R+GL  +P+GQWEA  +L +     YR +I PQ L  I P +    ++++KDT ++
Sbjct: 105 AEVYRSGLDAVPRGQWEAVTALNMSPSLAYRNIILPQALRPILPPVGNYLVAMLKDTPVL 164

Query: 242 SLISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVLCLTLSMLFKQVEKR 291
           S I++ E+      I + +    E   +VG  +L L + L+ L ++VE R
Sbjct: 165 SAITVVEIMQQAKNIGSETFRYLEPITMVGVFFLALSIVLAYLVRRVEAR 214