Pairwise Alignments

Query, 298 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 248 a.a., glutamate / aspartate ABC transporter - permease subunit from Pseudomonas putida KT2440

 Score =  125 bits (315), Expect = 7e-34
 Identities = 80/255 (31%), Positives = 136/255 (53%), Gaps = 22/255 (8%)

Query: 40  IHYQWHWREAWTLIFTPRADGS---LPYFLQGLGATLRLSLWGMVLALVLGSLIGIARSQ 96
           ++Y W W     + F     GS   L +++ GLG T+ +++   ++AL+LGSL+G+ R+ 
Sbjct: 1   MNYNWDWG----VFFKSTGVGSETYLDWYITGLGWTIAIAITAWIIALLLGSLLGVMRTV 56

Query: 97  KAWFVRLPANAFVQLVRNIPPLVFVFIFYFFISNQLIPLLGLDELLRYHTAEVHPLITWL 156
               V   A A+V+L RN+P LV +FI+YF     L+P L  + L  +   +++P  +  
Sbjct: 57  PNRLVSGIATAYVELFRNVPLLVQLFIWYF-----LVPDLLPEGLQEWFKQDLNPTTS-- 109

Query: 157 FGPARLWENLLSGVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLGLPTWGKYRYVIA 216
                    L+S V+C+GL ++A + E VR G+  +P+GQ  AA ++G      Y  V+ 
Sbjct: 110 --------ALISVVICLGLFTAARVCEQVRTGIQALPKGQEAAARAMGFSLPQIYNNVLL 161

Query: 217 PQVLTAITPALAGQTISLIKDTSIISLISIQELTFVGSEIANSSGLIFEIWLIVGAAYLV 276
           PQ    I P L  + +++ K++S+ SLI + EL     + A  S  +FE + +    Y  
Sbjct: 162 PQAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFT 221

Query: 277 LCLTLSMLFKQVEKR 291
           L + L +L + VEK+
Sbjct: 222 LNMGLMLLMRMVEKK 236