Pairwise Alignments

Query, 298 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 221 a.a., amino acid ABC transporter permease from Pectobacterium carotovorum WPP14

 Score =  117 bits (293), Expect = 2e-31
 Identities = 85/252 (33%), Positives = 125/252 (49%), Gaps = 36/252 (14%)

Query: 40  IHYQWHWREAWTLIFTPRADGSLPYFLQGLGATLRLSLWGMVLALVLGSLIGIARSQKAW 99
           +HYQW +   W          ++P  L+GLG TL L L   VL   LG ++G+ R     
Sbjct: 1   MHYQWDFSLVWH---------NIPVLLKGLGVTLELWLLAGVLGTALGLVLGLFRVFGKR 51

Query: 100 FVRLPANAFVQLVRNIPPLVFVFIFYFFISNQLIPLLGLDELLRYHTAEVHPLITWLFGP 159
           ++ LPA  FV++ RN P L+ +  FY+        L+GL    ++ T          FG 
Sbjct: 52  WLSLPARCFVEIFRNTPVLIQLIWFYYAFP----VLVGL----QFST----------FGA 93

Query: 160 ARLWENLLSGVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLGLPTWGKYRYVIAPQV 219
           A          L + L S+AY  EI RAGL +I  GQWE A +LG+      R V+ PQV
Sbjct: 94  A---------ALALTLYSAAYCTEIFRAGLQSIDHGQWEGAKALGMRHSVILRRVVLPQV 144

Query: 220 LTAITPALAGQTISLIKDTSIISLISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVLCL 279
           L  + PAL  + I L K TS+ S++++ EL + G  ++++     EI  +V   Y VL  
Sbjct: 145 LRNMLPALTNRMIELAKVTSLASILAVNELMYQGRLLSSTYYRPLEILTVVALLYFVLIW 204

Query: 280 TLSMLFKQVEKR 291
             S L  ++E+R
Sbjct: 205 PGSYLAARLERR 216