Pairwise Alignments

Query, 298 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 219 a.a., Glutamate transport membrane-spanning protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  110 bits (276), Expect = 2e-29
 Identities = 77/249 (30%), Positives = 114/249 (45%), Gaps = 35/249 (14%)

Query: 43  QWHWREAWTLIFTPRADGSLPYFLQGLGATLRLSLWGMVLALVLGSLIGIARSQKAWFVR 102
           Q+ W   W  I         P  L+G   TL +S+ G+   LV+G   G AR+   WF  
Sbjct: 2   QFDWSAIWPAI---------PLLLEGAKMTLWISVLGLAGGLVIGLAAGFARTFGGWFAN 52

Query: 103 LPANAFVQLVRNIPPLVFVFIFYFFISNQLIPLLGLDELLRYHTAEVHPLITWLFGPARL 162
             A  F++++R  P +V V   YF +             + ++   + P           
Sbjct: 53  HIALVFIEIIRGTPIVVQVMFIYFALP------------MAFNDLRIDPFS--------- 91

Query: 163 WENLLSGVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLGLPTWGKYRYVIAPQVLTA 222
                + V+ I + S AYIAEI R  + +I +G  EA  +LGL      R+VI P  L  
Sbjct: 92  -----AAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRRETIRHVILPLALRR 146

Query: 223 ITPALAGQTISLIKDTSIISLISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVLCLTLS 282
           + P L  Q I  IKDTS+  +I + ELT  G EI   +    EIW  V   YL++ L LS
Sbjct: 147 MLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLS 206

Query: 283 MLFKQVEKR 291
            + +++E+R
Sbjct: 207 FILRRLERR 215