Pairwise Alignments

Query, 298 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 224 a.a., Glutamate Aspartate transport system permease protein GltK (TC 3.A.1.3.4) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  116 bits (290), Expect = 5e-31
 Identities = 71/237 (29%), Positives = 121/237 (51%), Gaps = 28/237 (11%)

Query: 61  SLPYFLQGLGATLRLSLWGMVLALVLGSLIGIARSQK----AWFVRLPANAFVQLVRNIP 116
           SLPY L GL  TL++++  +++ +V G+++ + R       AWF    A A+V + R+IP
Sbjct: 12  SLPYLLAGLVITLKITVTAVIVGIVWGTILAVMRLSSFAPIAWF----AKAYVNVFRSIP 67

Query: 117 PLVFVFIFYFFISNQLIPLLGLDELLRYHTAEVHPLITWLFGPARLWENLLSGVLCIGLL 176
            ++ +  FY  +   L  +LGL                           L+S ++   + 
Sbjct: 68  LVMVLLWFYLIVPGFLQNVLGLSPKTDIR--------------------LISAMVAFSMF 107

Query: 177 SSAYIAEIVRAGLANIPQGQWEAADSLGLPTWGKYRYVIAPQVLTAITPALAGQTISLIK 236
            +AY +EI+RAG+ +I +GQ  AA +LG+  W   + +I PQ   A+ P L  Q I L +
Sbjct: 108 EAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQ 167

Query: 237 DTSIISLISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVLCLTLSMLFKQVEKRSL 293
           DTS++ ++S+ +     S I    G   E+ L  GA Y V+ L+ S+L   ++KR++
Sbjct: 168 DTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGAVYFVISLSASLLVSYLKKRTV 224