Pairwise Alignments

Query, 298 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 222 a.a., Cystine ABC transporter, permease protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  108 bits (269), Expect = 1e-28
 Identities = 70/231 (30%), Positives = 111/231 (48%), Gaps = 28/231 (12%)

Query: 61  SLPYFLQGLGATLRLSLWGMVLALVLGSLIGIARSQKAWFVRLPANAFVQLVRNIPPLVF 120
           SLPY L+G   TL+LS+ GM   L+LG ++ + R    W VR  A  ++ + R  P +  
Sbjct: 11  SLPYLLKGAVFTLQLSIGGMFFGLLLGFVLALMRMSPLWPVRWLARFYISIFRGTPLIAQ 70

Query: 121 VFIFYFFISNQLIPLLGLDELLRYHTAEVHPLITWLFGPARLWENLLSGVLCIGLLSSAY 180
           +F+ Y+ +     P  G+         E+ P+   + G              + L ++AY
Sbjct: 71  LFMIYYGL-----PQFGI---------ELDPIPAAMIG--------------LSLNTAAY 102

Query: 181 IAEIVRAGLANIPQGQWEAADSLGLPTWGKYRYVIAPQVLTAITPALAGQTISLIKDTSI 240
            +E +RA ++ I +GQWEAA S+G+  W   R  I PQ      P L+   ISL+KDTS+
Sbjct: 103 TSETLRAAISAIDKGQWEAAASIGMTPWQTLRRAILPQAARVALPPLSNSFISLVKDTSL 162

Query: 241 ISLISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVLCLTLSMLFKQVEKR 291
            + I + EL      I + +  +F ++L     Y V+   LS L    E +
Sbjct: 163 AATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWVMATVLSALQNYFENQ 213