Pairwise Alignments

Query, 298 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 393 a.a., amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family from Enterobacter asburiae PDN3

 Score =  111 bits (277), Expect = 3e-29
 Identities = 91/305 (29%), Positives = 137/305 (44%), Gaps = 79/305 (25%)

Query: 65  FLQGLGATLRLSLWGMVLALVLGSLIGIARSQKAWFVRLPANAFVQLVRNIPPLVFVFIF 124
           F+ GL  TL +S   +V A VLG  IG+AR  + W +R  +  +++  RNIPPL+ +F +
Sbjct: 84  FVVGLLNTLLVSALCIVFASVLGFFIGLARLSENWLLRKLSTVYIETFRNIPPLLQIFFW 143

Query: 125 YF-------------------FISNQLIPL-----------------------LGLDELL 142
           YF                   F+SN+ + +                        G+    
Sbjct: 144 YFAVLRNLPGPRQAVDAFELFFLSNRGLSIPSPQPGEGLYAFIGAIVIALALSAGVFRFN 203

Query: 143 RYH------------TAEVH----PLIT-WLFGPARLWE-----------------NLLS 168
           R H            TA V     PLI  WLFG A  W+                  L +
Sbjct: 204 RKHQIKTGQLRRTWPTAAVLIVSLPLIAHWLFGAALHWDIPHLRGFNFQGGMVLIPELAA 263

Query: 169 GVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLGLPTWGKYRYVIAPQVLTAITPALA 228
             L + + +SA+IAEI+RAG+  +P GQ EAA SLGLP     R VI PQ L  I P L 
Sbjct: 264 LTLALSIYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPHTVTLRQVIIPQALRVIIPPLT 323

Query: 229 GQTISLIKDTSIISLISIQELT--FVGSEIANSSGLIFEIWLIVGAAYLVLCLTLSMLFK 286
            Q ++++K++S+ + I   ++   F G+ + N +G   E   I  + YL++ L +S+L  
Sbjct: 324 SQYLNIVKNSSLAAAIGYPDMVSLFAGT-VLNQTGQAIETIAITMSVYLIISLVISLLMN 382

Query: 287 QVEKR 291
              +R
Sbjct: 383 LYNRR 387