Pairwise Alignments

Query, 298 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 224 a.a., amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family from Enterobacter asburiae PDN3

 Score =  116 bits (290), Expect = 5e-31
 Identities = 71/237 (29%), Positives = 121/237 (51%), Gaps = 28/237 (11%)

Query: 61  SLPYFLQGLGATLRLSLWGMVLALVLGSLIGIARSQK----AWFVRLPANAFVQLVRNIP 116
           S+PY L GL  TL++++  +++ +V G+L+ + R       AWF    A A+V + R+IP
Sbjct: 12  SMPYLLDGLVITLKITVIAIIIGIVWGTLLAVMRLSSFKPFAWF----ATAYVNMFRSIP 67

Query: 117 PLVFVFIFYFFISNQLIPLLGLDELLRYHTAEVHPLITWLFGPARLWENLLSGVLCIGLL 176
            ++ +  FY  +   L  +LGL                           L+S ++   + 
Sbjct: 68  LVMVLLWFYLIVPGFLQNVLGLSPKTDIR--------------------LISAMVAFSMF 107

Query: 177 SSAYIAEIVRAGLANIPQGQWEAADSLGLPTWGKYRYVIAPQVLTAITPALAGQTISLIK 236
            +AY +EI+RAG+ +I +GQ  AA +LG+  W   + +I PQ   A+ P L  Q I L +
Sbjct: 108 EAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMQLIILPQAFRAMVPLLLTQGIVLFQ 167

Query: 237 DTSIISLISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVLCLTLSMLFKQVEKRSL 293
           DTS++ ++S+ +     S I    G   E+ L  GA Y V+ L+ S+L   ++KR++
Sbjct: 168 DTSLVYVLSLADFFRTASTIGERDGTQVEMVLFAGAVYFVISLSASLLVSWLKKRTV 224