Pairwise Alignments

Query, 298 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 219 a.a., amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family from Enterobacter asburiae PDN3

 Score =  110 bits (274), Expect = 4e-29
 Identities = 77/249 (30%), Positives = 115/249 (46%), Gaps = 35/249 (14%)

Query: 43  QWHWREAWTLIFTPRADGSLPYFLQGLGATLRLSLWGMVLALVLGSLIGIARSQKAWFVR 102
           Q+ W   W  I         P  L+G   TL +S+ G+V  L++G + G AR+   W   
Sbjct: 2   QFDWSAIWPAI---------PILLEGAKMTLWISVLGLVGGLIIGLVAGFARTYGGWIAN 52

Query: 103 LPANAFVQLVRNIPPLVFVFIFYFFISNQLIPLLGLDELLRYHTAEVHPLITWLFGPARL 162
             A  F++++R  P +V V   YF      +P+   D  +                    
Sbjct: 53  HIALVFIEVIRGTPIVVQVMFIYF-----ALPMAFTDLRI-------------------- 87

Query: 163 WENLLSGVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLGLPTWGKYRYVIAPQVLTA 222
            +   + V+ I + S AYIAEI R  + +I +G  EA  +LGL      R+VI P  L  
Sbjct: 88  -DPFSAAVVTIMINSGAYIAEITRGAVLSIHKGFSEAGLALGLSRRETIRHVILPLALRR 146

Query: 223 ITPALAGQTISLIKDTSIISLISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVLCLTLS 282
           + P L  Q I  IKDTS+  +I + ELT  G EI   +    EIW  V   YL++ L LS
Sbjct: 147 MLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVVYLIITLVLS 206

Query: 283 MLFKQVEKR 291
            + +++E+R
Sbjct: 207 FVLRRLERR 215