Pairwise Alignments

Query, 298 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 219 a.a., glutamine ABC transporter permease GlnP from Escherichia coli ECRC62

 Score =  117 bits (293), Expect = 2e-31
 Identities = 78/249 (31%), Positives = 115/249 (46%), Gaps = 35/249 (14%)

Query: 43  QWHWREAWTLIFTPRADGSLPYFLQGLGATLRLSLWGMVLALVLGSLIGIARSQKAWFVR 102
           Q+ W   W  I         P  ++G   TL +S+ G+   LV+G L G AR+   W   
Sbjct: 2   QFDWSAIWPAI---------PLLIEGAKMTLWISVLGLAGGLVIGLLAGFARTFGGWIAN 52

Query: 103 LPANAFVQLVRNIPPLVFVFIFYFFISNQLIPLLGLDELLRYHTAEVHPLITWLFGPARL 162
             A  F++++R  P +V V   YF +             + ++   + P           
Sbjct: 53  HVALVFIEVIRGTPIVVQVMFIYFALP------------MAFNDLRIDPFT--------- 91

Query: 163 WENLLSGVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLGLPTWGKYRYVIAPQVLTA 222
                + V+ I + S AYIAEI R  + +I +G  EA  +LGL  W   RYVI P  L  
Sbjct: 92  -----AAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRR 146

Query: 223 ITPALAGQTISLIKDTSIISLISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVLCLTLS 282
           + P L  Q I  IKDTS+  +I + ELT  G EI   +    EIW  V   YL++ L LS
Sbjct: 147 MLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLS 206

Query: 283 MLFKQVEKR 291
            + +++E+R
Sbjct: 207 FILRRLERR 215