Pairwise Alignments

Query, 298 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 393 a.a., Putative amino-acid ABC transporter permease protein YhdX from Escherichia coli ECRC62

 Score =  113 bits (282), Expect = 8e-30
 Identities = 97/361 (26%), Positives = 159/361 (44%), Gaps = 93/361 (25%)

Query: 22  LLAIASLIGWLYYRSEVGIH-------YQWHWREAWT-----LIFTPRADGSLPYFLQGL 69
           ++A+  ++GWL++ +   ++       + +  R A       LI   + D     F+ GL
Sbjct: 29  VVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVFIVGL 88

Query: 70  GATLRLSLWGMVLALVLGSLIGIARSQKAWFVRLPANAFVQLVRNIPPLVFVFIFYF--- 126
             TL +S   +V A VLG  IG+AR    W +R  +  ++++ RNIPPL+ +F +YF   
Sbjct: 89  LNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWYFAVL 148

Query: 127 ----------------FISNQLI----PLLGLDELLRYHTAEVHPLIT------------ 154
                           F+SN+ +    P LG D  + +  A V  ++             
Sbjct: 149 RNLPGPRQAVSAFDLAFLSNRGLYIPSPQLG-DGFIAFILAVVMAIVLSVGLFRFNKTYQ 207

Query: 155 -------------------------WLFGPARLWE-----------------NLLSGVLC 172
                                    WLFG A  W+                  L +  L 
Sbjct: 208 IKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAALTLA 267

Query: 173 IGLLSSAYIAEIVRAGLANIPQGQWEAADSLGLPTWGKYRYVIAPQVLTAITPALAGQTI 232
           + + +SA+IAEI+RAG+  +P GQ EAA SLGLP     R VI PQ L  I P L  Q +
Sbjct: 268 LSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTSQYL 327

Query: 233 SLIKDTSIISLISIQELT--FVGSEIANSSGLIFEIWLIVGAAYLVLCLTLSMLFKQVEK 290
           +++K++S+ + I   ++   F G+ + N +G   E   +  + YL++ LT+S+L     +
Sbjct: 328 NIVKNSSLAAAIGYPDMVSLFAGT-VLNQTGQAIETIAMTMSVYLIISLTISLLMNIYNR 386

Query: 291 R 291
           R
Sbjct: 387 R 387