Pairwise Alignments

Query, 298 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 246 a.a., glutamate/aspartate ABC transporter permease GltJ from Escherichia coli ECRC100

 Score =  104 bits (260), Expect = 2e-27
 Identities = 64/230 (27%), Positives = 119/230 (51%), Gaps = 15/230 (6%)

Query: 62  LPYFLQGLGATLRLSLWGMVLALVLGSLIGIARSQKAWFVRLPANAFVQLVRNIPPLVFV 121
           L +   G   T+ LS+   ++A ++GS  GI R+    F+      +V+L RN+P +V  
Sbjct: 22  LGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVPLIVQF 81

Query: 122 FIFYFFISNQLIPLLGLDELLRYHTAEVHPLITWLFGPARLWENLLSGVLCIGLLSSAYI 181
           F +Y  I   L   +G+     +  AE+ P I +           LS +LC+GL ++A +
Sbjct: 82  FTWYLVIPELLPEKIGM-----WFKAELDPNIQFF----------LSSMLCLGLFTAARV 126

Query: 182 AEIVRAGLANIPQGQWEAADSLGLPTWGKYRYVIAPQVLTAITPALAGQTISLIKDTSII 241
            E VRA + ++P+GQ  AA ++GL     YRYV+ P     I P +  + ++L+K+++I 
Sbjct: 127 CEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIA 186

Query: 242 SLISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVLCLTLSMLFKQVEKR 291
           S I + ++    S++ + S   +E +  +  AY+ +   + ++   VE++
Sbjct: 187 STIGLVDMAAQASKLLDYSAHAWESFTAITLAYVFINAFIMLVMTLVERK 236