Pairwise Alignments

Query, 298 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 385 a.a., ABC transporter, membrane spanning protein (amino acid) from Agrobacterium fabrum C58

 Score =  101 bits (252), Expect = 2e-26
 Identities = 60/182 (32%), Positives = 95/182 (52%), Gaps = 25/182 (13%)

Query: 68  GLGATLRLSLWGMVLALVLGSLIGIARSQKAWFVRLPANAFVQLVRNIPPLVFVFIFYFF 127
           GL  TL LS +G+ ++L  G L+ + R      +++    F++++R IP      I   F
Sbjct: 175 GLMVTLILSFFGITVSLPFGILLALGRRSNLPVIKMLCVLFIEVIRGIP-----LITVLF 229

Query: 128 ISNQLIPLLGLDELLRYHTAEVHPLITWLFGPARLWENLLSGVLCIGLLSSAYIAEIVRA 187
            ++ ++PL   D               W F      +  L  ++ + L SSAY+AE++R 
Sbjct: 230 FASIMLPLFLPDG--------------WTF------DKFLRALVGVSLFSSAYMAEVIRG 269

Query: 188 GLANIPQGQWEAADSLGLPTWGKYRYVIAPQVLTAITPALAGQTISLIKDTSIISLISIQ 247
           GL  IP+GQ+E ADSLGL  W K R ++ PQ L  + P +    I L KDTS++S+I + 
Sbjct: 270 GLQAIPKGQYEGADSLGLNYWQKTRLIVLPQALKLVIPGIVNTFIGLFKDTSLVSIIGMF 329

Query: 248 EL 249
           +L
Sbjct: 330 DL 331