Pairwise Alignments

Query, 278 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 266 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  105 bits (262), Expect = 1e-27
 Identities = 66/238 (27%), Positives = 116/238 (48%), Gaps = 2/238 (0%)

Query: 38  DAIKERGTLRVGMS-TFVPWAMRDKQGELIGFEIDVAKRLAADSGWQVEFVPTAWDGIIP 96
           DA++ RG L+VG + T+VP+ M DKQG ++GFEID+   ++   G ++E V   +  ++ 
Sbjct: 29  DAVR-RGVLKVGTTPTYVPFEMTDKQGRIVGFEIDLLNVMSQALGVELEMVSMPYTELVA 87

Query: 97  ALLAKKFDVIIGGMSVTPERSKSVLFTAPYSHSGVQLAANKKLAEGFTQLEDFNKRNVKI 156
            L AK FD+I  GM+VT ER+  + F+  +   G  +  + +LA     +ED +  + +I
Sbjct: 88  GLQAKSFDLIGSGMTVTQERNLKLNFSDSFIVVGQSVLLHPRLAGKVASVEDLDDASYQI 147

Query: 157 AARRGAFTVQVARETFPKASVLQFDDDAQAFQEVINGNAHAVIASSPKPEHESIKHSDSL 216
           A   G      AR     A +  F    +  ++V+ G A A I  +P       +  ++ 
Sbjct: 148 ATTEGTTGEAAARRFLGAARISSFSTPEEGVRQVVQGKADAFIHDAPYNLIALSRPENAT 207

Query: 217 FLPFSERLSKGNEAFAVRLGEEDKKAFFDQWIADRTADGWLQARYEYWFSTLDWQDQI 274
            L   +  +    AF V+ G+ D   + + ++     DG     ++ WF+   W  +I
Sbjct: 208 LLALEQPFTFEPLAFGVKKGDVDSLNWINHFLNQIAQDGTYDRLHDKWFNDTAWLAEI 265