Pairwise Alignments

Query, 278 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 250 a.a., amino acid ABC transporter from Pseudomonas simiae WCS417

 Score = 82.0 bits (201), Expect = 1e-20
 Identities = 68/246 (27%), Positives = 114/246 (46%), Gaps = 20/246 (8%)

Query: 14  KTLLTGLLGLAFTLPAVASDTPNLDAIKERGTLRVGM-STFVPWAMRDKQGELIGFEIDV 72
           K LL   + +AF+  A+A             TL++G+ + + P+  +D  G ++GF+ D+
Sbjct: 6   KFLLAAAVSMAFSATAMAE------------TLKMGIEAAYPPFNNKDASGNVVGFDKDI 53

Query: 73  AKRLAADSGWQ-VEFVPTAWDGIIPALLAKKFDVIIGGMSVTPERSKSVLFTAPYSHSGV 131
              L A    +  E   + WDGIIPAL AKKFD ++  +S+T ER  +V FT PY  + +
Sbjct: 54  GDALCAKMKVEKCEVYVSDWDGIIPALNAKKFDFLVSSLSITEERKAAVDFTDPYYSNKL 113

Query: 132 QLAANKKLAEGFTQLEDFNKRNVKIAARRGAFTVQVARETFPKASVLQFDDDAQAFQEVI 191
           Q  A K  A+ F     + K  V I A+R         +  P      +D    A+ ++ 
Sbjct: 114 QFIAPKATAD-FKTDAAYLKGKV-IGAQRATLAGTYLEDKLPDTEAKLYDTQENAYLDLT 171

Query: 192 NGNAHAVIASSPKPEHESIKHSDSLFLPF--SERLSKGNEAFAVRLGEEDKKAFFDQWIA 249
           +G    ++A     ++E +K  D     F     +       AVR G+  ++   ++ +A
Sbjct: 172 SGRLDGILADK-YVQYEWLKSKDGSAYEFKGDPVVESDKIGIAVRKGDPLRER-LNKALA 229

Query: 250 DRTADG 255
           +  ADG
Sbjct: 230 EIKADG 235