Pairwise Alignments

Query, 278 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 265 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score = 97.4 bits (241), Expect = 3e-25
 Identities = 71/246 (28%), Positives = 117/246 (47%), Gaps = 7/246 (2%)

Query: 21  LGLAFTLPAVASDTPNLDAIKERGTLRVGMST-FVPWAMRDKQGELIGFEIDVAKRLAAD 79
           LG A T+ A  +   ++  IK++G + +GM   F P+   D + +  G++ DVAK LA D
Sbjct: 16  LGAALTVFAPFACAQSVADIKKKGEITIGMLVDFPPYGTTDAKNQPDGYDADVAKLLAKD 75

Query: 80  SGWQVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPERSKSVLFTAPYSHSGVQL-AANKK 138
            G +   VP      IP LL  K D+++  +++TPER+K V F+ PY+ + + L  A+K 
Sbjct: 76  WGVKANIVPVTGPNRIPFLLTNKVDLLVASLAITPERAKQVQFSQPYAAATIVLYGASKT 135

Query: 139 LAEGFTQLEDFNKRNVKIAARRGAFTVQVARETFPKASVLQFDDDAQAFQEVINGNAHAV 198
             +    L+          AR     V V +       + +FDDDA A Q +I+G   A 
Sbjct: 136 PIKAAADLKGLRVG----VARASTQDVAVTKAAPEGTEIRRFDDDASAMQALISGQVDA- 190

Query: 199 IASSPKPEHESIKHSDSLFLPFSERLSKGNEAFAVRLGEEDKKAFFDQWIADRTADGWLQ 258
           I  S     +  K   +        L + +   A+R G+E+     ++++   TA+G L 
Sbjct: 191 IGCSVTVAAQIAKRVPANTYENKFTLVQQSMGIAMRPGQEELTKAVNEFVQKNTANGELN 250

Query: 259 ARYEYW 264
             Y+ W
Sbjct: 251 KLYQKW 256