Pairwise Alignments

Query, 278 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 277 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score = 92.4 bits (228), Expect = 1e-23
 Identities = 72/246 (29%), Positives = 111/246 (45%), Gaps = 11/246 (4%)

Query: 24  AFTLPAVASDTPNLDAIKERGTLRVG-MSTFVPWAMRDKQGEL-IGFEIDVAKRLAADSG 81
           +FTL   A     LD +++ G LRV       P+   D   +  +G +ID+A   A   G
Sbjct: 17  SFTLGGAAW-ADRLDDVRKAGVLRVAAFDGNPPFGYIDPASKKQVGHDIDLATEFAKSLG 75

Query: 82  WQVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPERSKSVLFTAPYSHSGVQLAANKKLAE 141
            ++E VPT     IP L + K DV+    ++T ER+K+V FT PY   G Q  A K + +
Sbjct: 76  VKIELVPTNPANRIPLLTSGKVDVVFASFTITDERAKAVDFTTPYFLVGQQFLAKKGVLK 135

Query: 142 GFTQLEDFNKRNVKIAARRGAFTVQVARETFPKASVLQFDDDAQAFQEVINGNAHAVIAS 201
              Q++D     ++I   +G       R+ +P A V+ +DD   A   + NGN  A+   
Sbjct: 136 DAAQIKD-----IRIGTEKGTTMESNLRKNYPDAKVVLYDDSPFALAALRNGNVQAITND 190

Query: 202 SPK--PEHESIKHSDSLFLPFSERLSKGNEAFAVRLGEEDKKAFFDQWIADRTADGWLQA 259
             K   +  +I   +   +P    +SK     AV  GE       + W+ D   +G   A
Sbjct: 191 GVKLTAQWNAIPDKEKYEIP-PITVSKEYLGAAVPKGEARLLEALNTWLVDSEKNGRALA 249

Query: 260 RYEYWF 265
            Y+ WF
Sbjct: 250 IYDTWF 255