Pairwise Alignments

Query, 278 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 266 a.a., Amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

 Score =  142 bits (359), Expect = 6e-39
 Identities = 82/252 (32%), Positives = 132/252 (52%), Gaps = 1/252 (0%)

Query: 20  LLGLAFTLPAVASDTPNLDAIKERGTLRVGMS-TFVPWAMRDKQGELIGFEIDVAKRLAA 78
           L+G+   +   A+    +D   +RGTLRVGM  T++P+ M +K+GE+IGFE+D+ K +A 
Sbjct: 10  LVGVTALVAVTAAQAGAIDDAVKRGTLRVGMDPTYMPFQMTNKRGEIIGFEVDILKAMAK 69

Query: 79  DSGWQVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPERSKSVLFTAPYSHSGVQLAANKK 138
             G + E V TA+DGIIPALL  KFD+I  GM++T ER+  + F+ P+   G  L   K+
Sbjct: 70  SMGVKFEAVSTAYDGIIPALLTDKFDMIGSGMTLTQERNLRLNFSEPFIVVGQTLLIRKE 129

Query: 139 LAEGFTQLEDFNKRNVKIAARRGAFTVQVARETFPKASVLQFDDDAQAFQEVINGNAHAV 198
           LA      +D N    ++ ++ G     V+++   KA    +D++ +A  +V+NG A A 
Sbjct: 130 LAGEIKSYKDLNNEKYRLTSKLGTTGEMVSKKLISKAKYHGYDNEQEAVMDVVNGKADAF 189

Query: 199 IASSPKPEHESIKHSDSLFLPFSERLSKGNEAFAVRLGEEDKKAFFDQWIADRTADGWLQ 258
           +  +P       K      L   E  +    AF ++ G+ D   F + ++     DG   
Sbjct: 190 VYDAPYNVVAVDKAGAGKLLFLDEPFTYEPLAFGLKKGDYDSINFINNFLHQIKHDGTYD 249

Query: 259 ARYEYWFSTLDW 270
             ++ WF   DW
Sbjct: 250 RIHDKWFKNKDW 261